Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1220 178 2e-42 seq1212 178 2e-42 >seq1220 Length=2478420 Score = 178 bits (196), Expect = 2e-42 Identities = 215/288 (75%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||| || |||| || | ||| | |||||||||||| ||||||||||| || Sbjct 873970 TGCTCTTCAGTGAGTGTCGAGGTGGGCCGACAATTTTACTTTGAACAAATTAGAGTGCTC 873911 Query 100 AAAGCAGGCCTT------TGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGC 152 ||||| ||| |||| ||||| | |||||||||||||||||| || | | Sbjct 873910 AAAGCGGGCTCAAAATGCTGCTTGAATATTTCGTGCATGGAATAATAGAATATGATCT-C 873852 Query 153 GGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 ||||||||||||||||||| || || || ||||||||||||||||||| ||||| Sbjct 873851 GGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGTAATGATTAATAGGGATAACTGGGGGC 873792 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| || ||||||||||||||||||| ||||| ||| | ||||| Sbjct 873791 ATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACATCAGCGAA 873732 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || |||| | ||||||||| ||||| ||||||||||||| || Sbjct 873731 AGCATTTGCCAAAGGTGTTTTCATCAATCA-AGAACGAAAGTTAGAGG 873685 >seq1212 Length=986824 Score = 178 bits (196), Expect = 2e-42 Identities = 215/288 (75%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||| || |||| || | ||| | |||||||||||| ||||||||||| || Sbjct 846844 TGCTCTTCAGTGAGTGTCGAGGTGGGCCGACAATTTTACTTTGAACAAATTAGAGTGCTC 846785 Query 100 AAAGCAGGCCTT------TGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGC 152 ||||| ||| |||| ||||| | |||||||||||||||||| || | | Sbjct 846784 AAAGCGGGCTCAAAATGCTGCTTGAATATTTCGTGCATGGAATAATAGAATATGATCT-C 846726 Query 153 GGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGTAATGATTAATAGGGATAGTCGGGGGT 210 ||||||||||||||||||| || || || ||||||||||||||||||| ||||| Sbjct 846725 GGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGTAATGATTAATAGGGATAACTGGGGGC 846666 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| || ||||||||||||||||||| ||||| ||| | ||||| Sbjct 846665 ATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACATCAGCGAA 846606 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || |||| | ||||||||| ||||| ||||||||||||| || Sbjct 846605 AGCATTTGCCAAAGGTGTTTTCATCAATCA-AGAACGAAAGTTAGAGG 846559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915133181248