Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1220 136 2e-29 seq1212 136 2e-29 >seq1220 Length=2478420 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 871733 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 871674 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 871673 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 871614 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 871613 AGAGAGTTCAAGAGTACGTGAAA 871591 Score = 134 bits (148), Expect = 6e-29 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||| || || |||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 870967 GAGCGCAGATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 870908 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 870907 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 870848 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 870847 TAGGGGCGA 870839 >seq1212 Length=986824 Score = 136 bits (150), Expect = 2e-29 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 844607 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 844548 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 844547 ATTACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 844488 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 844487 AGAGAGTTCAAGAGTACGTGAAA 844465 Score = 134 bits (148), Expect = 6e-29 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||| || || |||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 843841 GAGCGCAGATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 843782 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 843781 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 843722 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 843721 TAGGGGCGA 843713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079843393550