Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1220 214 3e-53 seq1212 214 3e-53 >seq1220 Length=2478420 Score = 214 bits (236), Expect = 3e-53 Identities = 215/282 (76%), Gaps = 37/282 (13%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 873161 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 873220 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--------GCCAC 123 | |||| || | |||| |||||| |||||||||||||| ||| | Sbjct 873221 C-TCAATCT-CGTGCGGCTCGAAGCCGCCGGTCCCTCTAAGAAGAATTTAAATACGCCGC 873278 Query 124 CAA------------CCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 || || || || |||| | |||||||||||| || Sbjct 873279 CAGTGAGTTGCGCGGCCGAAGCCGCACACACCTAAATGGCGACGCCTATTTAGCAGGCTA 873338 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 873339 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 873398 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 873399 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 873440 >seq1212 Length=986824 Score = 214 bits (236), Expect = 3e-53 Identities = 215/282 (76%), Gaps = 37/282 (13%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 846035 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 846094 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--------GCCAC 123 | |||| || | |||| |||||| |||||||||||||| ||| | Sbjct 846095 C-TCAATCT-CGTGCGGCTCGAAGCCGCCGGTCCCTCTAAGAAGAATTTAAATACGCCGC 846152 Query 124 CAA------------CCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 || || || || |||| | |||||||||||| || Sbjct 846153 CAGTGAGTTGCGCGGCCGAAGCCGCACACACCTAAATGGCGACGCCTATTTAGCAGGCTA 846212 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 846213 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 846272 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||| | |||||||| Sbjct 846273 GCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 846314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796743643581