Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1220 351 2e-94 seq1212 351 2e-94 >seq1220 Length=2478420 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 868530 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 868589 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 868590 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 868649 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 868650 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 868709 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 868710 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 868768 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 868769 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 868809 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 881924 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 881983 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 881984 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 882043 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 882044 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 882103 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 882104 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 882162 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 882163 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 882203 >seq1212 Length=986824 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 841404 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 841463 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 841464 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 841523 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841524 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 841583 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 841584 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 841642 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 841643 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 841683 Score = 333 bits (368), Expect = 5e-89 Identities = 218/239 (91%), Gaps = 1/239 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 854798 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 854857 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 854858 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 854917 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 854918 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 854977 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 854978 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTGC 855036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854337620256