Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1220 102 8e-20 seq1212 102 8e-20 >seq1220 Length=2478420 Score = 102 bits (112), Expect = 8e-20 Identities = 136/185 (74%), Gaps = 13/185 (7%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65 |||||||||||| ||||||||| | ||||||| ||| |||| |||| ||| Sbjct 873937 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCTGCTTGAAT--ATTT 873880 Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121 | ||||||||||||||||| || | |||||||||||||| ||||| || || | Sbjct 873879 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 873821 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||||| ||||| | ||||| || | |||||||||||| Sbjct 873820 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 873761 Query 182 TGGAT 186 ||||| Sbjct 873760 TGGAT 873756 >seq1212 Length=986824 Score = 102 bits (112), Expect = 8e-20 Identities = 136/185 (74%), Gaps = 13/185 (7%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65 |||||||||||| ||||||||| | ||||||| ||| |||| |||| ||| Sbjct 846811 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATGCTGCTTGAAT--ATTT 846754 Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121 | ||||||||||||||||| || | |||||||||||||| ||||| || || | Sbjct 846753 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 846695 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||||| ||||| | ||||| || | |||||||||||| Sbjct 846694 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 846635 Query 182 TGGAT 186 ||||| Sbjct 846634 TGGAT 846630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511963787040