Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028484.1
Length=11343
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 141 7e-30
>seq1802
Length=132586
Score = 141 bits (156), Expect = 7e-30
Identities = 424/647 (66%), Gaps = 8/647 (1%)
Strand=Plus/Minus
Query 6523 TTCTTGAAGGAGATCGATGAACAAGGATTGCAGGAAGATGATTTGGTAATTGGATTAAAG 6582
|| ||||| ||| || |||| || || || | || || | || || |||||| |
Sbjct 31122 TTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGG 31063
Query 6583 GCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGCGCCTT 6642
| || ||| || | ||||| | | ||| |||| ||||| || ||| ||| |
Sbjct 31062 GGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTA 31003
Query 6643 CGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTATTCAAA 6702
| || || || ||| | || ||||||| || || | || | | ||| | ||
Sbjct 31002 AGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCG 30945
Query 6703 GGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACACAAGT 6762
|||||||| ||||| ||||| | | ||| | | ||||||||| | | | | | |
Sbjct 30944 GGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAAT 30885
Query 6763 GGACAAGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTACGAAAAG 6822
|| ||||| | ||| || | ||||||| |||| ||||| || |||| ||||||
Sbjct 30884 GGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAG 30825
Query 6823 TGGAACAATTTCCAAAGATATGAATC-AACAGCTCCTGTTTTCCGGGTGATTGGACAATT 6881
||||||||| |||||| ||||| | |||| |||||||||| || || ||||||||
Sbjct 30824 TGGAACAATCATCAAAGAGATGAAGCGAACAA-TCCTGTTTTCACAGTCATGGGACAATT 30766
Query 6882 TTTTGGTCTACCGAACTT-ATTTGTGCGAACGCATGAATTCTTTGAAAAAGCACTGGTGT 6940
||| || || || || || | | ||||| ||||||||||| || | | |
Sbjct 30765 TTTAGGGTATCCTAATTTGATCTCT-CGAACCCATGAATTCTTCCAATCGAGTTTAATTT 30707
Query 6941 ACTATCGAGACAGACCTGACCTGATGAAGGTCGTGGACGATCAAGTGTACAATAGGGATG 7000
| || | |||||||| || |||| || | || | || | | || | ||
Sbjct 30706 ATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTTTAGAAAACAAAGACC 30647
Query 7001 ATACGAAGAGGGTTAGCTGGAATGGTCAAAAAGGAGGCTTGGAAGGTCTTCGCCAAAAAG 7060
|| |||||||||| |||||||||||||| |||||| | || || || | |||||||
Sbjct 30646 CTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAG 30587
Query 7061 GATGGAGTGTATTGAATCTTTTAGTGATTGAACGAGAATCTCGTATCCGAAACACCGAAA 7120
|||| | |||| | | || || ||| || ||||| | | ||| || |
Sbjct 30586 GATGAA--GTATCGTTTATTATAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGAC 30529
Query 7121 TAAAAACGCTGGCTCAAGGAGACAATCAAGTGATTTGCACTCAATAT 7167
| | | |||| |||||||| |||||||| | || |||||||||
Sbjct 30528 TTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATAT 30482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36179428113348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |