Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_028484.1 Length=11343 Score E Sequences producing significant alignments: (Bits) Value seq1802 141 7e-30 >seq1802 Length=132586 Score = 141 bits (156), Expect = 7e-30 Identities = 424/647 (66%), Gaps = 8/647 (1%) Strand=Plus/Minus Query 6523 TTCTTGAAGGAGATCGATGAACAAGGATTGCAGGAAGATGATTTGGTAATTGGATTAAAG 6582 || ||||| ||| || |||| || || || | || || | || || |||||| | Sbjct 31122 TTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGG 31063 Query 6583 GCAAAAGAGAGAGAGATTAAGTGGAAAGGACGATTCTTTGCACTCATGAGTTGGCGCCTT 6642 | || ||| || | ||||| | | ||| |||| ||||| || ||| ||| | Sbjct 31062 GGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTA 31003 Query 6643 CGCGAGTACTTTGTATTTACTGAATATTTAATCAAGAAGAATGTGATCCCACTATTCAAA 6702 | || || || ||| | || ||||||| || || | || | | ||| | || Sbjct 31002 AGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCG 30945 Query 6703 GGATTGACCATGGCGGATGATCAAACGACTTTGATCAAGAAGATGATTCAGAACACAAGT 6762 |||||||| ||||| ||||| | | ||| | | ||||||||| | | | | | | Sbjct 30944 GGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAAT 30885 Query 6763 GGACAAGGAGGAAATGATTACAAGCATATAACGTTTGCGAATCACATCGATTACGAAAAG 6822 || ||||| | ||| || | ||||||| |||| ||||| || |||| |||||| Sbjct 30884 GGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAG 30825 Query 6823 TGGAACAATTTCCAAAGATATGAATC-AACAGCTCCTGTTTTCCGGGTGATTGGACAATT 6881 ||||||||| |||||| ||||| | |||| |||||||||| || || |||||||| Sbjct 30824 TGGAACAATCATCAAAGAGATGAAGCGAACAA-TCCTGTTTTCACAGTCATGGGACAATT 30766 Query 6882 TTTTGGTCTACCGAACTT-ATTTGTGCGAACGCATGAATTCTTTGAAAAAGCACTGGTGT 6940 ||| || || || || || | | ||||| ||||||||||| || | | | Sbjct 30765 TTTAGGGTATCCTAATTTGATCTCT-CGAACCCATGAATTCTTCCAATCGAGTTTAATTT 30707 Query 6941 ACTATCGAGACAGACCTGACCTGATGAAGGTCGTGGACGATCAAGTGTACAATAGGGATG 7000 | || | |||||||| || |||| || | || | || | | || | || Sbjct 30706 ATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTTTAGAAAACAAAGACC 30647 Query 7001 ATACGAAGAGGGTTAGCTGGAATGGTCAAAAAGGAGGCTTGGAAGGTCTTCGCCAAAAAG 7060 || |||||||||| |||||||||||||| |||||| | || || || | ||||||| Sbjct 30646 CTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAG 30587 Query 7061 GATGGAGTGTATTGAATCTTTTAGTGATTGAACGAGAATCTCGTATCCGAAACACCGAAA 7120 |||| | |||| | | || || ||| || ||||| | | ||| || | Sbjct 30586 GATGAA--GTATCGTTTATTATAAACATTAAAAGAGAAGGTAAAGTTGAAAATACGAGAC 30529 Query 7121 TAAAAACGCTGGCTCAAGGAGACAATCAAGTGATTTGCACTCAATAT 7167 | | | |||| |||||||| |||||||| | || ||||||||| Sbjct 30528 TTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATAT 30482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36179428113348