Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_032907.1
Length=13109
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 953 0.0
>seq1802
Length=132586
Score = 953 bits (1056), Expect = 0.0
Identities = 2348/3511 (67%), Gaps = 91/3511 (3%)
Strand=Plus/Minus
Query 7654 GATGTTGTTCTAGTCATATACGGGTCATTCAGACATTGGGGCCATCCATTCCTGGAATAC 7713
||| ||||||| || | ||||| ||||| ||||||||||| ||||| || || || ||
Sbjct 31611 GATCTTGTTCTTGTTGTTTACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTAT 31552
Query 7714 TTGGAAGGACTAAAGAAATTAAGAGAACAAACAACATTACCTAAACAGATAGA-CACAGA 7772
| ||||||| || || ||| ||||||||||| ||| ||| ||| || | |||
Sbjct 31551 CTACAAGGACTCAAAAAGTTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAGA 31492
Query 7773 CTATGCTAACAAACTGGCAAGTGACCTAGCATACATCGTTTTGAAGAATCAATTTGACAA 7832
||||| | | | ||||||||| ||||| | || || |||||||||||||| |||||
Sbjct 31491 -TATGCGCAGGCATTAGCAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAA 31433
Query 7833 GAACAAAAAATGGTTTGTTGATGTCGATCGTCTCCCTCCTGATCACAAGCT-TA-GAGAT 7890
|| || | |||| ||||| | ||| | | |||||| || || ||
Sbjct 31432 AAAGAAGATTTGGTCAGTTGAAACCAATCTATTGCGAAAAGATCACCCTCTATATGACTC 31373
Query 7891 AATATTGTAAACAATACCTGGCCCACTCCCTTCCAAATCAAAGACTTCCAAGATGAGTGG 7950
||| | | || ||||| ||||| ||||| || || |||| |||||| ||| | |||
Sbjct 31372 AAT-TACTCAA-AATACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGG 31315
Query 7951 CATCGACTCCCGCTGTCAAAGTGTTTTGAGATTCCAGATGTTGTTGATCCAAGCTTAATT 8010
||| || || || ||||||||||||||| || ||||| | ||||| || |||||
Sbjct 31314 CATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATC 31255
Query 8011 TATGCAGACAAAAGTCATTCAGTATGCAGGTCTGAAATTATTGAACATATAAAGTCAAAC 8070
||||| || ||||| |||||| | || | |||| | || ||| ||| | |
Sbjct 31254 TATGCTGATAAAAGCCATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATAT 31195
Query 8071 CCTATGACACCAATTCCTTCGAAAAAAGTCTTAGAGACATTTATAAATACTCCTGCTACA 8130
|| | | || || || || || || || ||||||| ||||| || | ||| || |||
Sbjct 31194 CCGAATATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACA 31135
Query 8131 AACTGGAAAGAATTCCTAACAGAAGTAAATGACAATGGGCTAGATATGGAGCATCTTGTA 8190
| |||||| || | | ||| || ||||| |||| |||| ||| |||||||
Sbjct 31134 GAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTT 31075
Query 8191 ATCGGGCTGAGAGGAAAGGAAAGAGAAATCAAAAGGATAGGTCGATTCTTCGCTCTTATG 8250
||||| | | || ||||| || |||| ||||| |||||| |||| || |||||||||
Sbjct 31074 ATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATG 31015
Query 8251 TCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATTTCGTC 8310
|| ||||| | |||||||| |||||||| ||| |||||| |||||| | ||||| ||
Sbjct 31014 TCCTGGAAATTAAGAGATTATTTCGTAATAACA--ATATTTGATTAAAGTGCATTTTGTG 30957
Query 8311 CCTCTCTTCTCCGGATTAACTATGGCAGATGATCTAAACACAGTTGTTaaaaaaaTGCTC 8370
|| | || || ||||| |||||||||||||| || || || || | || || ||| |
Sbjct 30956 CCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTA 30897
Query 8371 GATACATCTAATGGACAAGGGTTAGACGTTTACGACTATATCACAATGGCAAATCATATA 8430
||||| || ||||| ||||||||||| | || || ||||| ||||| || ||||||||
Sbjct 30896 GATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATT 30837
Query 8431 GATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCTTCACTGTC 8490
||||||| || ||||| || |||||||||| || || ||||||||||| ||||| |||
Sbjct 30836 AATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTC 30777
Query 8491 ATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACAAGAACACATGAGTTCTTTGAAAAA 8550
||||| || ||| |||| ||||| | | || | |||| ||||| ||||| ||
Sbjct 30776 ATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCG 30717
Query 8551 AGCTTGATCTATTACAACAACAGAACAGACCTAATGTATGTAAGAGATGGGGTTGTTTTG 8610
|| || || ||||||||||| ||| | || |||||| || | ||| | | |||| |
Sbjct 30716 AGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGA--AGCTCGTTTAG 30659
Query 8611 --AACAAAGATGATGACACGCCTGTCTGTTGGAATGGTCAGGCCGGAGGACTAGAGGGGC 8668
|||||||| | | | || || ||||||||||| || ||||||||||||||||
Sbjct 30658 AAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGC 30599
Query 8669 TGAGACAAAAAGGCTGGAGTATAGTCAACTTACTGGTAATCAAGAGAGAGGGTCGAGTCG 8728
||||||||||||| || ||||| || | ||| | || || ||||| ||| ||| |
Sbjct 30598 TGAGACAAAAAGGATGAAGTATCGTTTA-TTA-TAAACATTAAAAGAGAAGGTAAAGTTG 30541
Query 8729 AGAACACAAGACTGAGCATTCTGGCCCAAGGAGATAATCAAGTCGTTTGCACTCAATACA 8788
| || || ||||| || || |||| ||||||||||||||||| || || |||||||| |
Sbjct 30540 AAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATA 30481
Query 8789 AACTCCAGAAAACTCGTACGACCAGAGAATTAGACATCTGTATTGATAGAGTGTTGCTAA 8848
|||| ||||| | || | | || ||| |||| ||||| | ||| | | ||
Sbjct 30480 AACTGCAGAAGATACGATCAAGCAATGAACTAGATGAATGTATCCAAAGAATTATATCAA 30421
Query 8849 ATAATGACAAAATTNNNNGAAATATAGAAGAAGGAACAAGAAAACTAGGATTATTGATAA 8908
| || | ||||| | || |||||| ||||||| | ||| ||||| || || |
Sbjct 30420 ACAACAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTA 30361
Query 8909 ACAAGGACGAAACAATAAAATCTGCAGATTATCTGAATTACGGAAAGGTCCCAATCTTTC 8968
| | || ||||| || || || || |||||| ||||||| || ||||| || || ||||
Sbjct 30360 ATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTC 30301
Query 8969 GAGGCAAAATCAAGGGACTAGAATCCAAACGATGGTCAAGAGCTGCCTGCGTATCAAATG 9028
| || ||| | || || | ||||| ||| ||||||| ||| || || | || || |
Sbjct 30300 GTGGGAAAGTAAAAGGGATGGAATCAAAAAGATGGTC-CGAGTAGCATGTATGTCTAACG 30242
Query 9029 ATCAACTCCCCACAATTAGCAATATATTATCAACTATATCATCCAATGCGCTATCTGTTG 9088
||||| | || ||||| || |||||| | || | |||| || || || ||||||| |
Sbjct 30241 ATCAATTACCTACAATAAGTAATATAATCTCTATGGTATCTTCTAACGCATTATCTGTAG 30182
Query 9089 GTCATTTCGCAGAATCCCCTGTGGATGCCATCTGTCATTATAACTTTCTAGGAAATCTCA 9148
| || || ||||||| ||| ||||| | || |||||||| |||||||||||| |
Sbjct 30181 GGCACTTTTCAGAATCTCCTTTGGATTCAATTATCCATTATAATTTTCTAGGAAATTTAG 30122
Query 9149 CATTAGGAGTATTAAACCTCCACAACCCTGCAGTCAA---AGGTCCGATCAAGTCTTGCT 9205
|||| ||| ||| | || || ||||| ||| | || || ||||| ||| || ||
Sbjct 30121 TTTTAGAAGTCTTAGATCTTCATAACCCAGCAATTAAAGCAGCTCCGA-CAATTC--ACT 30065
Query 9206 TAAACCCCAA--AGATCAGGTCAGCTATATGTCTAAAAACTACAAAATCCTATTACTGTA 9263
| | ||||| || || | || | | | ||| || | ||| || || | ||
Sbjct 30064 TGA--CCCAACTTGAACAACAAAACTTTCTCAATCGAAAATATAGAATTTTAGTATTATA 30007
Query 9264 TTTAGACCCATCCCTAGGAGGGATCTGTGGAATGTCTTTGACAAGATTTTTAATCAGATC 9323
|||||| || || | || || ||||| |||||||| | || | |||||||||||| |
Sbjct 30006 TTTAGATCCCTCTTTGGGCGGCATCTGCGGAATGTCACTAACTCGTTTTTTAATCAGAGC 29947
Query 9324 TTTCCCTGACCCACTCACTGAAAGCTTAGCTTTCTGGCAGGGTATCTTCCCACTCGTAAG 9383
|| ||||| || | |||||||| ||| | || ||||| || || | | |||| |
Sbjct 29946 ATTTCCTGATCCTGTAACTGAAAGTTTATCATTTTGGCAAGGGATTT----ATCCGTATG 29891
Query 9384 TACCCCA----ACGCAAAGACTCATCTCAGCGATAGGATCACCCAT-AATGGGGAGATAT 9438
|| | | | || | | ||| ||| ||||||| |||| | || | |||
Sbjct 29890 TATCTTACGATATTCAGCAATTAATCACAGTGATAGGA-AACCCTTCTATTAACACGTAT 29832
Query 9439 GATCGAGGGGCCTTTGCGAAGCTGCTGGAGAATCCACTTGCTTTAAATCTAAGACACAGT 9498
| |||| || |||| || || | || || ||| | | ||||| || | ||| |
Sbjct 29831 CAGAGAGGTGCATTTGTAAAATTGTTAGAAAACCCATTATCCTTAAACCTCAAACATGGA 29772
Query 9499 GTCAACCCGGTGCAGATGATCAAAGATGAGATCAGGAGAGAACTAATTAAGAATTGTGAC 9558
|||| || ||||| | || ||||| ||||||| | | | ||||| || ||||||
Sbjct 29771 ATCAATCCAGTGCAATTAATTAAAGAAGAGATCAAAAAACATTTAATTCGAAAGTGTGAC 29712
Query 9559 TCCATAAAAAACAAAATTGTGCAACATGCGATCCAGCACTCTAGAGATGAGGAGGAATCC 9618
|| ||||| | || | | ||||| | || || ||| ||||||| || ||| |
Sbjct 29711 AAGCTAGAAAACCATATCATAAAGCATGCAGTTCAACATTCTCGAGATGAAGAAGAACCT 29652
Query 9619 CTATATGCATTTCTT-GAAACGATAACCCCCAGATTCCCAAGGTTTCTGAGTGAATACAA 9677
|| | ||| |||||| |||| || | || |||||||| | ||| | || || || ||
Sbjct 29651 CTCTTTGC-TTTCTTAGAAAGTATTAAACCTAGATTCCCTCGTTTTTTAAGCGAGTATAA 29593
Query 9678 AGCGGCCACTTACCTAGGAATGACAGAAAGTCTGGTTGGACTTTTCCAAAATTCAAAGAC 9737
| || ||||| |||| ||||||||||| | || || || ||||||||||| || ||
Sbjct 29592 GTCAGCAACTTATTTAGGTTTGACAGAAAGTTTAGTGGGCCTGTTCCAAAATTCGAAAAC 29533
Query 9738 CATCAGAAATGTCTTTTCAAGAAGAATGAAAAAGACAATAGATGAGATCATTGTAAAATC 9797
|| | | ||||||| || | ||||| | |||||| |||||| | |||||
Sbjct 29532 AATTCGTACCCTCTTTTCTCGACATCTAAAAAAATCTATAGATTCAATCATTATCAAATC 29473
Query 9798 GGAGATACAGAGCGTGAAAGGCATGATAGACATTGTTCAGAGAGGAAAGCGAAGTGGGAT 9857
|| | | || | | ||| | || | | || ||| | ||| || |
Sbjct 29472 TGAATTGGACAGTATTAGAGGACTAATTAAGA-TGGTCAACG----CAGCCAAAGATTCT 29418
Query 9858 AAATGTC-----TGGAGATGTAGCAGCGAGAAAGCAGACGTGCTAAGGCAAATATCTTGG 9912
||| || ||| |||| || ||||| || | || || ||| ||||||
Sbjct 29417 AAACCTCGATTGTGGGAATGTTCTAGTTTCAAAGCCGATTTACTCAGATCAATGTCTTGG 29358
Query 9913 GGGAACGATATCGTGGGAGCAACGATTCCCCATCCATTTGAGATGAT-AAAGTCTCCGAC 9971
|| ||| | || || || || || || ||||||||||| ||||| |||| ||
Sbjct 29357 GGAGGAGATTTAGTTGGGGCTACAATACCTCATCCATTTGAAATGATCAAAGATGTTGA- 29299
Query 9972 ACTCTCATACAA-ATG---CCCCCATGATGAAGCAGAGACG-GTAATT--GAACGATCCT 10024
||| || |||| || | | || | || || ||| ||| || | || |
Sbjct 29298 ACTGGCA-ACAATGTGTAACGCACACG--GA--CA---ACGTGTATTTCCATATAATTGT 29247
Query 10025 T-TTTGTCGGTATTAGTACCGAAAGGGATACCATTAAATGACGCTAAAAAAGGACCATAT 10083
| ||||| || || | || || ||||| || | || | |||| |||||||| ||
Sbjct 29246 TCCTTGTCCGTTCTAATCCCAAAGGGGATCCCGTCCTATAATCCTAAGAAAGGACCTTAC 29187
Query 10084 AAGCCATATCTAGGATCTCGGACCACTGAGAGCACATCCCTCTTAAGACCTTGGGAGAAC 10143
||| ||||| |||| || || ||| || || || || ||| ||| ||||| |
Sbjct 29186 AAGGCATATTTAGGGTCAAAAACATGTGAAAGTACTTCTCTTCTAAAACCGTGGGAATAT 29127
Query 10144 GAGTCCAAAGTGCCCCTTATCAGACGGGCGGCTGAACTCAGGAAAGCCTTTAACTGGTTT 10203
||| | ||| | || | || ||| | || |||| | || || || || | ||||||
Sbjct 29126 GAGACAAAAATACCATTAATTAGAAGAGCATCTGATTTAAGAAAGGCTTTCCATTGGTTT 29067
Query 10204 GTCAACCCTGACTCTCATTTAGGGAGATCCATCTTAAACAATTTGCACTCTCTTACAGGG 10263
|| | ||||| || | || || | || || | || ||||| | | || || ||
Sbjct 29066 GTAGAACCTGAGTCAAACTTGGGAAAGTCAATAATCAATAATTTAGAAGCCCTAACTGGT 29007
Query 10264 GAAGTATGGATCGAAGAAGGAGTTAAGGCACAAAGATCTGGATCTGCACTCCACAGGTTT 10323
|||| |||| |||| | | ||| ||||||||| ||||| || || | |||
Sbjct 29006 ATCAAATGGGAAGAAGCAGGATTAAGGGCTTTAAGATCTGGCTCTGCTCTACATCGTTTT 28947
Query 10324 AGCTGCTCGAGACAAAGTCAAGGGGGATACATCGCCCAATCTCCCTTTTGTGGTACATGG 10383
|||||||| |||| || ||||| || || || |||||||| || | | ||| ||||||
Sbjct 28946 AGCTGCTCTCGACAGAGCCAAGGAGGTTATATTGCCCAATCACCTCTCTATGGAACATGG 28887
Query 10384 ATGCTAGAGACTACGGACTCAATGCATGGTCTAGGAGAACAGAATTATGACTTCTTGTTC 10443
||| | || || || | ||| || || || ||| || | ||||||| | ||
Sbjct 28886 ATGATTACAACAACTGATACTATGGGTGAACTGGGTGAAAGAAACTTTGACTTCCTATTT 28827
Query 10444 CAGGCACTTCTGTTATATGGACAAATAACTACTGGAGAGATACACAGGGGTTTGAGATCA 10503
||||| | || || || || ||||| ||| ||| ||| || | | ||||||
Sbjct 28826 CAGGCTTTACTATTGTACGGTCAAATGACTGCTGCAGAAGTA------GCTCCCAGATCA 28773
Query 10504 TCAGGTT-ACTAT-----CATTATCACATCCAATGCCACTCTTGTATTCGAGAGATAAAT 10557
| || || || |||| || | ||||| | || |||||| ||||||| |
Sbjct 28772 AATGATTCACAATTTTTCCATTTCCATGTAAAATGCAAATCATGTATTAGAGAGATTGAA 28713
Query 10558 GAAATCACCCTAGATGCAG-GATACGAATATCATCCCAAAGAAGTATCTGACATCTTAAA 10616
||| |||| ||| |||| ||| ||| |||| ||| | ||| || || ||
Sbjct 28712 CCAATACTAATAGACTCAGATATAC-CTTATTATCACAAACCAGTTTTTGAAATATTGAA 28654
Query 10617 TTCCTGGAAACCAGAAGGAACAGAATGGATCACTAAACGACAGA-GTGTAGAGATGAAGC 10675
|| |||||||| || | | || ||||| ||| ||| | | || | | | |
Sbjct 28653 CTCTTGGAAACCTGACGATCCTGATTGGATTGAAAAAAGACCCACATTTACA---GTACC 28597
Query 10676 CCGGAGTATGGGGCCCTAAACGAC--TTGAAGAGAAATCATATCATATCGGAAAAACACA 10733
| || || | | ||| | ||| | ||||| | | | || || ||| | ||
Sbjct 28596 TTTGGGTGACTGGACATTTTTGACAATAGAAAAAAAATCTTTTTACATAGGGAAATCTCA 28537
Query 10734 GGGCTTCCTATTCGGAGATATGGTACACAAATCAAGACATGGGAAGGATGAC--TCATCA 10791
| || ||| || || || || | | | | | | ||||| || ||| ||| |
Sbjct 28536 AAGATTTGCATTTGGGGAGATTTTATATATAGCTAAAGGTGGGAGAGAAGACAGTCA--A 28479
Query 10792 TTATTTCCATTGGTTTTGAGAGACAAGTTAAATCCAAAATTATATATGACAGGATTGATC 10851
|| || |||||||| || ||||||| | |||| || ||| || ||| | ||
Sbjct 28478 TTGTTCCCATTGGTCCTGCGAGACAAAGTGGATCCCCGATATTATTTGCTGGGAATTATA 28419
Query 10852 ACAGGATTAATACAGGCCTCCTCAAT-AGCAGCCTTATACAAAAGATCTATTCAGACATT 10910
|| || ||||| || || || || ||| || || || |||||||| || || | |
Sbjct 28418 TACGGTTTGATACATGCTTCATCTATCAGC-GCTTTGTATAAAAGATCGATACAAGCCCT 28360
Query 10911 GAAGAGGCCCAAACAAATCCTGTTAGGACAAGTCCTCTACGCAATCGACCTACTGAGTCT 10970
|||| ||| | | | || || |||||||| | | | |||||| | |||
Sbjct 28359 CAAGAAGCCACTTCCAGTACTATTGGGACAAGTATTATTCTTTATCGACAATTTAAGTAA 28300
Query 10971 AAACGAAGGGGTGATTAATATTTGGAGATCAGATAGATTCTTGGAAGAGTTCATAACAGT 11030
||| ||||| | || ||||||||||| ||| | ||||| ||| || || ||||||||
Sbjct 28299 AAATGAAGGAATTATAAATATTTGGAGGTCAAACAGATTTTTGACTGAATTTATAACAGT 28240
Query 11031 CCCTCATAGAATACCATCCTCATATCCTTTAAATAACTCTGATCTCGGAGCTCTAGGCAG 11090
||||||||||| || | || |||||| | ||||| |||| | ||| || |||| |
Sbjct 28239 TCCTCATAGAATTCCCCCATCTTATCCTCTTAATAATGTTGATTTAGGAACTTTAGGACG 28180
Query 11091 AAATTATATGAGAACTCTATTTACAAGATTT 11121
|||||| | | | | |||||| ||||||
Sbjct 28179 AAATTACTTAAAATCCCTATTTTGCAGATTT 28149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41826868769136
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