Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_032907.1 Length=13109 Score E Sequences producing significant alignments: (Bits) Value seq1802 953 0.0 >seq1802 Length=132586 Score = 953 bits (1056), Expect = 0.0 Identities = 2348/3511 (67%), Gaps = 91/3511 (3%) Strand=Plus/Minus Query 7654 GATGTTGTTCTAGTCATATACGGGTCATTCAGACATTGGGGCCATCCATTCCTGGAATAC 7713 ||| ||||||| || | ||||| ||||| ||||||||||| ||||| || || || || Sbjct 31611 GATCTTGTTCTTGTTGTTTACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTAT 31552 Query 7714 TTGGAAGGACTAAAGAAATTAAGAGAACAAACAACATTACCTAAACAGATAGA-CACAGA 7772 | ||||||| || || ||| ||||||||||| ||| ||| ||| || | ||| Sbjct 31551 CTACAAGGACTCAAAAAGTTACATGAACAAACAACTTTAAAGAAAACGATTGATCGAAGA 31492 Query 7773 CTATGCTAACAAACTGGCAAGTGACCTAGCATACATCGTTTTGAAGAATCAATTTGACAA 7832 ||||| | | | ||||||||| ||||| | || || |||||||||||||| ||||| Sbjct 31491 -TATGCGCAGGCATTAGCAAGTGACTTAGCACATATTGTGTTGAAGAATCAATTCGACAA 31433 Query 7833 GAACAAAAAATGGTTTGTTGATGTCGATCGTCTCCCTCCTGATCACAAGCT-TA-GAGAT 7890 || || | |||| ||||| | ||| | | |||||| || || || Sbjct 31432 AAAGAAGATTTGGTCAGTTGAAACCAATCTATTGCGAAAAGATCACCCTCTATATGACTC 31373 Query 7891 AATATTGTAAACAATACCTGGCCCACTCCCTTCCAAATCAAAGACTTCCAAGATGAGTGG 7950 ||| | | || ||||| ||||| ||||| || || |||| |||||| ||| | ||| Sbjct 31372 AAT-TACTCAA-AATACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGG 31315 Query 7951 CATCGACTCCCGCTGTCAAAGTGTTTTGAGATTCCAGATGTTGTTGATCCAAGCTTAATT 8010 ||| || || || ||||||||||||||| || ||||| | ||||| || ||||| Sbjct 31314 CATACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATC 31255 Query 8011 TATGCAGACAAAAGTCATTCAGTATGCAGGTCTGAAATTATTGAACATATAAAGTCAAAC 8070 ||||| || ||||| |||||| | || | |||| | || ||| ||| | | Sbjct 31254 TATGCTGATAAAAGCCATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATAT 31195 Query 8071 CCTATGACACCAATTCCTTCGAAAAAAGTCTTAGAGACATTTATAAATACTCCTGCTACA 8130 || | | || || || || || || || ||||||| ||||| || | ||| || ||| Sbjct 31194 CCGAATATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACA 31135 Query 8131 AACTGGAAAGAATTCCTAACAGAAGTAAATGACAATGGGCTAGATATGGAGCATCTTGTA 8190 | |||||| || | | ||| || ||||| |||| |||| ||| ||||||| Sbjct 31134 GAATGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTT 31075 Query 8191 ATCGGGCTGAGAGGAAAGGAAAGAGAAATCAAAAGGATAGGTCGATTCTTCGCTCTTATG 8250 ||||| | | || ||||| || |||| ||||| |||||| |||| || ||||||||| Sbjct 31074 ATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATG 31015 Query 8251 TCATGGAAGCTGAGAGATTACTTCGTAATTACAGAATATTTAATTAAATTACATTTCGTC 8310 || ||||| | |||||||| |||||||| ||| |||||| |||||| | ||||| || Sbjct 31014 TCCTGGAAATTAAGAGATTATTTCGTAATAACA--ATATTTGATTAAAGTGCATTTTGTG 30957 Query 8311 CCTCTCTTCTCCGGATTAACTATGGCAGATGATCTAAACACAGTTGTTaaaaaaaTGCTC 8370 || | || || ||||| |||||||||||||| || || || || | || || ||| | Sbjct 30956 CCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTA 30897 Query 8371 GATACATCTAATGGACAAGGGTTAGACGTTTACGACTATATCACAATGGCAAATCATATA 8430 ||||| || ||||| ||||||||||| | || || ||||| ||||| || |||||||| Sbjct 30896 GATACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATT 30837 Query 8431 GATTATGAGAAATGGAATAACCATCAAAGAGGAGAGGCAAACAATCCTGTCTTCACTGTC 8490 ||||||| || ||||| || |||||||||| || || ||||||||||| ||||| ||| Sbjct 30836 AATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTC 30777 Query 8491 ATGGGTCAGTTTCTAGGATATCCAAGCCTCATAACAAGAACACATGAGTTCTTTGAAAAA 8550 ||||| || ||| |||| ||||| | | || | |||| ||||| ||||| || Sbjct 30776 ATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCG 30717 Query 8551 AGCTTGATCTATTACAACAACAGAACAGACCTAATGTATGTAAGAGATGGGGTTGTTTTG 8610 || || || ||||||||||| ||| | || |||||| || | ||| | | |||| | Sbjct 30716 AGTTTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGA--AGCTCGTTTAG 30659 Query 8611 --AACAAAGATGATGACACGCCTGTCTGTTGGAATGGTCAGGCCGGAGGACTAGAGGGGC 8668 |||||||| | | | || || ||||||||||| || |||||||||||||||| Sbjct 30658 AAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGC 30599 Query 8669 TGAGACAAAAAGGCTGGAGTATAGTCAACTTACTGGTAATCAAGAGAGAGGGTCGAGTCG 8728 ||||||||||||| || ||||| || | ||| | || || ||||| ||| ||| | Sbjct 30598 TGAGACAAAAAGGATGAAGTATCGTTTA-TTA-TAAACATTAAAAGAGAAGGTAAAGTTG 30541 Query 8729 AGAACACAAGACTGAGCATTCTGGCCCAAGGAGATAATCAAGTCGTTTGCACTCAATACA 8788 | || || ||||| || || |||| ||||||||||||||||| || || |||||||| | Sbjct 30540 AAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAATATA 30481 Query 8789 AACTCCAGAAAACTCGTACGACCAGAGAATTAGACATCTGTATTGATAGAGTGTTGCTAA 8848 |||| ||||| | || | | || ||| |||| ||||| | ||| | | || Sbjct 30480 AACTGCAGAAGATACGATCAAGCAATGAACTAGATGAATGTATCCAAAGAATTATATCAA 30421 Query 8849 ATAATGACAAAATTNNNNGAAATATAGAAGAAGGAACAAGAAAACTAGGATTATTGATAA 8908 | || | ||||| | || |||||| ||||||| | ||| ||||| || || | Sbjct 30420 ACAACAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTAATTA 30361 Query 8909 ACAAGGACGAAACAATAAAATCTGCAGATTATCTGAATTACGGAAAGGTCCCAATCTTTC 8968 | | || ||||| || || || || |||||| ||||||| || ||||| || || |||| Sbjct 30360 ATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGATTTTTC 30301 Query 8969 GAGGCAAAATCAAGGGACTAGAATCCAAACGATGGTCAAGAGCTGCCTGCGTATCAAATG 9028 | || ||| | || || | ||||| ||| ||||||| ||| || || | || || | Sbjct 30300 GTGGGAAAGTAAAAGGGATGGAATCAAAAAGATGGTC-CGAGTAGCATGTATGTCTAACG 30242 Query 9029 ATCAACTCCCCACAATTAGCAATATATTATCAACTATATCATCCAATGCGCTATCTGTTG 9088 ||||| | || ||||| || |||||| | || | |||| || || || ||||||| | Sbjct 30241 ATCAATTACCTACAATAAGTAATATAATCTCTATGGTATCTTCTAACGCATTATCTGTAG 30182 Query 9089 GTCATTTCGCAGAATCCCCTGTGGATGCCATCTGTCATTATAACTTTCTAGGAAATCTCA 9148 | || || ||||||| ||| ||||| | || |||||||| |||||||||||| | Sbjct 30181 GGCACTTTTCAGAATCTCCTTTGGATTCAATTATCCATTATAATTTTCTAGGAAATTTAG 30122 Query 9149 CATTAGGAGTATTAAACCTCCACAACCCTGCAGTCAA---AGGTCCGATCAAGTCTTGCT 9205 |||| ||| ||| | || || ||||| ||| | || || ||||| ||| || || Sbjct 30121 TTTTAGAAGTCTTAGATCTTCATAACCCAGCAATTAAAGCAGCTCCGA-CAATTC--ACT 30065 Query 9206 TAAACCCCAA--AGATCAGGTCAGCTATATGTCTAAAAACTACAAAATCCTATTACTGTA 9263 | | ||||| || || | || | | | ||| || | ||| || || | || Sbjct 30064 TGA--CCCAACTTGAACAACAAAACTTTCTCAATCGAAAATATAGAATTTTAGTATTATA 30007 Query 9264 TTTAGACCCATCCCTAGGAGGGATCTGTGGAATGTCTTTGACAAGATTTTTAATCAGATC 9323 |||||| || || | || || ||||| |||||||| | || | |||||||||||| | Sbjct 30006 TTTAGATCCCTCTTTGGGCGGCATCTGCGGAATGTCACTAACTCGTTTTTTAATCAGAGC 29947 Query 9324 TTTCCCTGACCCACTCACTGAAAGCTTAGCTTTCTGGCAGGGTATCTTCCCACTCGTAAG 9383 || ||||| || | |||||||| ||| | || ||||| || || | | |||| | Sbjct 29946 ATTTCCTGATCCTGTAACTGAAAGTTTATCATTTTGGCAAGGGATTT----ATCCGTATG 29891 Query 9384 TACCCCA----ACGCAAAGACTCATCTCAGCGATAGGATCACCCAT-AATGGGGAGATAT 9438 || | | | || | | ||| ||| ||||||| |||| | || | ||| Sbjct 29890 TATCTTACGATATTCAGCAATTAATCACAGTGATAGGA-AACCCTTCTATTAACACGTAT 29832 Query 9439 GATCGAGGGGCCTTTGCGAAGCTGCTGGAGAATCCACTTGCTTTAAATCTAAGACACAGT 9498 | |||| || |||| || || | || || ||| | | ||||| || | ||| | Sbjct 29831 CAGAGAGGTGCATTTGTAAAATTGTTAGAAAACCCATTATCCTTAAACCTCAAACATGGA 29772 Query 9499 GTCAACCCGGTGCAGATGATCAAAGATGAGATCAGGAGAGAACTAATTAAGAATTGTGAC 9558 |||| || ||||| | || ||||| ||||||| | | | ||||| || |||||| Sbjct 29771 ATCAATCCAGTGCAATTAATTAAAGAAGAGATCAAAAAACATTTAATTCGAAAGTGTGAC 29712 Query 9559 TCCATAAAAAACAAAATTGTGCAACATGCGATCCAGCACTCTAGAGATGAGGAGGAATCC 9618 || ||||| | || | | ||||| | || || ||| ||||||| || ||| | Sbjct 29711 AAGCTAGAAAACCATATCATAAAGCATGCAGTTCAACATTCTCGAGATGAAGAAGAACCT 29652 Query 9619 CTATATGCATTTCTT-GAAACGATAACCCCCAGATTCCCAAGGTTTCTGAGTGAATACAA 9677 || | ||| |||||| |||| || | || |||||||| | ||| | || || || || Sbjct 29651 CTCTTTGC-TTTCTTAGAAAGTATTAAACCTAGATTCCCTCGTTTTTTAAGCGAGTATAA 29593 Query 9678 AGCGGCCACTTACCTAGGAATGACAGAAAGTCTGGTTGGACTTTTCCAAAATTCAAAGAC 9737 | || ||||| |||| ||||||||||| | || || || ||||||||||| || || Sbjct 29592 GTCAGCAACTTATTTAGGTTTGACAGAAAGTTTAGTGGGCCTGTTCCAAAATTCGAAAAC 29533 Query 9738 CATCAGAAATGTCTTTTCAAGAAGAATGAAAAAGACAATAGATGAGATCATTGTAAAATC 9797 || | | ||||||| || | ||||| | |||||| |||||| | ||||| Sbjct 29532 AATTCGTACCCTCTTTTCTCGACATCTAAAAAAATCTATAGATTCAATCATTATCAAATC 29473 Query 9798 GGAGATACAGAGCGTGAAAGGCATGATAGACATTGTTCAGAGAGGAAAGCGAAGTGGGAT 9857 || | | || | | ||| | || | | || ||| | ||| || | Sbjct 29472 TGAATTGGACAGTATTAGAGGACTAATTAAGA-TGGTCAACG----CAGCCAAAGATTCT 29418 Query 9858 AAATGTC-----TGGAGATGTAGCAGCGAGAAAGCAGACGTGCTAAGGCAAATATCTTGG 9912 ||| || ||| |||| || ||||| || | || || ||| |||||| Sbjct 29417 AAACCTCGATTGTGGGAATGTTCTAGTTTCAAAGCCGATTTACTCAGATCAATGTCTTGG 29358 Query 9913 GGGAACGATATCGTGGGAGCAACGATTCCCCATCCATTTGAGATGAT-AAAGTCTCCGAC 9971 || ||| | || || || || || || ||||||||||| ||||| |||| || Sbjct 29357 GGAGGAGATTTAGTTGGGGCTACAATACCTCATCCATTTGAAATGATCAAAGATGTTGA- 29299 Query 9972 ACTCTCATACAA-ATG---CCCCCATGATGAAGCAGAGACG-GTAATT--GAACGATCCT 10024 ||| || |||| || | | || | || || ||| ||| || | || | Sbjct 29298 ACTGGCA-ACAATGTGTAACGCACACG--GA--CA---ACGTGTATTTCCATATAATTGT 29247 Query 10025 T-TTTGTCGGTATTAGTACCGAAAGGGATACCATTAAATGACGCTAAAAAAGGACCATAT 10083 | ||||| || || | || || ||||| || | || | |||| |||||||| || Sbjct 29246 TCCTTGTCCGTTCTAATCCCAAAGGGGATCCCGTCCTATAATCCTAAGAAAGGACCTTAC 29187 Query 10084 AAGCCATATCTAGGATCTCGGACCACTGAGAGCACATCCCTCTTAAGACCTTGGGAGAAC 10143 ||| ||||| |||| || || ||| || || || || ||| ||| ||||| | Sbjct 29186 AAGGCATATTTAGGGTCAAAAACATGTGAAAGTACTTCTCTTCTAAAACCGTGGGAATAT 29127 Query 10144 GAGTCCAAAGTGCCCCTTATCAGACGGGCGGCTGAACTCAGGAAAGCCTTTAACTGGTTT 10203 ||| | ||| | || | || ||| | || |||| | || || || || | |||||| Sbjct 29126 GAGACAAAAATACCATTAATTAGAAGAGCATCTGATTTAAGAAAGGCTTTCCATTGGTTT 29067 Query 10204 GTCAACCCTGACTCTCATTTAGGGAGATCCATCTTAAACAATTTGCACTCTCTTACAGGG 10263 || | ||||| || | || || | || || | || ||||| | | || || || Sbjct 29066 GTAGAACCTGAGTCAAACTTGGGAAAGTCAATAATCAATAATTTAGAAGCCCTAACTGGT 29007 Query 10264 GAAGTATGGATCGAAGAAGGAGTTAAGGCACAAAGATCTGGATCTGCACTCCACAGGTTT 10323 |||| |||| |||| | | ||| ||||||||| ||||| || || | ||| Sbjct 29006 ATCAAATGGGAAGAAGCAGGATTAAGGGCTTTAAGATCTGGCTCTGCTCTACATCGTTTT 28947 Query 10324 AGCTGCTCGAGACAAAGTCAAGGGGGATACATCGCCCAATCTCCCTTTTGTGGTACATGG 10383 |||||||| |||| || ||||| || || || |||||||| || | | ||| |||||| Sbjct 28946 AGCTGCTCTCGACAGAGCCAAGGAGGTTATATTGCCCAATCACCTCTCTATGGAACATGG 28887 Query 10384 ATGCTAGAGACTACGGACTCAATGCATGGTCTAGGAGAACAGAATTATGACTTCTTGTTC 10443 ||| | || || || | ||| || || || ||| || | ||||||| | || Sbjct 28886 ATGATTACAACAACTGATACTATGGGTGAACTGGGTGAAAGAAACTTTGACTTCCTATTT 28827 Query 10444 CAGGCACTTCTGTTATATGGACAAATAACTACTGGAGAGATACACAGGGGTTTGAGATCA 10503 ||||| | || || || || ||||| ||| ||| ||| || | | |||||| Sbjct 28826 CAGGCTTTACTATTGTACGGTCAAATGACTGCTGCAGAAGTA------GCTCCCAGATCA 28773 Query 10504 TCAGGTT-ACTAT-----CATTATCACATCCAATGCCACTCTTGTATTCGAGAGATAAAT 10557 | || || || |||| || | ||||| | || |||||| ||||||| | Sbjct 28772 AATGATTCACAATTTTTCCATTTCCATGTAAAATGCAAATCATGTATTAGAGAGATTGAA 28713 Query 10558 GAAATCACCCTAGATGCAG-GATACGAATATCATCCCAAAGAAGTATCTGACATCTTAAA 10616 ||| |||| ||| |||| ||| ||| |||| ||| | ||| || || || Sbjct 28712 CCAATACTAATAGACTCAGATATAC-CTTATTATCACAAACCAGTTTTTGAAATATTGAA 28654 Query 10617 TTCCTGGAAACCAGAAGGAACAGAATGGATCACTAAACGACAGA-GTGTAGAGATGAAGC 10675 || |||||||| || | | || ||||| ||| ||| | | || | | | | Sbjct 28653 CTCTTGGAAACCTGACGATCCTGATTGGATTGAAAAAAGACCCACATTTACA---GTACC 28597 Query 10676 CCGGAGTATGGGGCCCTAAACGAC--TTGAAGAGAAATCATATCATATCGGAAAAACACA 10733 | || || | | ||| | ||| | ||||| | | | || || ||| | || Sbjct 28596 TTTGGGTGACTGGACATTTTTGACAATAGAAAAAAAATCTTTTTACATAGGGAAATCTCA 28537 Query 10734 GGGCTTCCTATTCGGAGATATGGTACACAAATCAAGACATGGGAAGGATGAC--TCATCA 10791 | || ||| || || || || | | | | | | ||||| || ||| ||| | Sbjct 28536 AAGATTTGCATTTGGGGAGATTTTATATATAGCTAAAGGTGGGAGAGAAGACAGTCA--A 28479 Query 10792 TTATTTCCATTGGTTTTGAGAGACAAGTTAAATCCAAAATTATATATGACAGGATTGATC 10851 || || |||||||| || ||||||| | |||| || ||| || ||| | || Sbjct 28478 TTGTTCCCATTGGTCCTGCGAGACAAAGTGGATCCCCGATATTATTTGCTGGGAATTATA 28419 Query 10852 ACAGGATTAATACAGGCCTCCTCAAT-AGCAGCCTTATACAAAAGATCTATTCAGACATT 10910 || || ||||| || || || || ||| || || || |||||||| || || | | Sbjct 28418 TACGGTTTGATACATGCTTCATCTATCAGC-GCTTTGTATAAAAGATCGATACAAGCCCT 28360 Query 10911 GAAGAGGCCCAAACAAATCCTGTTAGGACAAGTCCTCTACGCAATCGACCTACTGAGTCT 10970 |||| ||| | | | || || |||||||| | | | |||||| | ||| Sbjct 28359 CAAGAAGCCACTTCCAGTACTATTGGGACAAGTATTATTCTTTATCGACAATTTAAGTAA 28300 Query 10971 AAACGAAGGGGTGATTAATATTTGGAGATCAGATAGATTCTTGGAAGAGTTCATAACAGT 11030 ||| ||||| | || ||||||||||| ||| | ||||| ||| || || |||||||| Sbjct 28299 AAATGAAGGAATTATAAATATTTGGAGGTCAAACAGATTTTTGACTGAATTTATAACAGT 28240 Query 11031 CCCTCATAGAATACCATCCTCATATCCTTTAAATAACTCTGATCTCGGAGCTCTAGGCAG 11090 ||||||||||| || | || |||||| | ||||| |||| | ||| || |||| | Sbjct 28239 TCCTCATAGAATTCCCCCATCTTATCCTCTTAATAATGTTGATTTAGGAACTTTAGGACG 28180 Query 11091 AAATTATATGAGAACTCTATTTACAAGATTT 11121 |||||| | | | | |||||| |||||| Sbjct 28179 AAATTACTTAAAATCCCTATTTTGCAGATTT 28149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41826868769136