Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_032982.1 Length=11670 Score E Sequences producing significant alignments: (Bits) Value seq1802 109 4e-20 >seq1802 Length=132586 Score = 109 bits (120), Expect = 4e-20 Identities = 212/308 (69%), Gaps = 10/308 (3%) Strand=Plus/Minus Query 6710 ATCGGATTAAGTGCAAAGGAGAGAGAATTGAAGATCATTGGGCGGTTTTTTGCACTGATG 6769 ||||||||| | | |||||| || || | || | || || | |||||||| || ||| Sbjct 31074 ATCGGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATG 31015 Query 6770 ACATGGAAACTTAGGGAATACTTTGTGTTCACTGAGTACTTGATAAAAACTCATTTCGTC 6829 | |||||| | || || || || || | || | || ||||| ||| ||||| || Sbjct 31014 TCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTG 30957 Query 6830 CCCTTGTTCTCGGGATTGACCATGAGTGATGACCATTCAACCCTTGTGAAAAAATTGATA 6889 || ||||| ||||||||||| ||| ||||||| | || | | || || || || Sbjct 30956 CCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTA 30897 Query 6890 GAATGCACCTC---TGGCCAAGGGATAGACGGCTGCGACTCCATAGGGATCTCTAATCAT 6946 || || || ||| |||||| |||| || | || | ||| || |||||||| Sbjct 30896 GA---TACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCAT 30840 Query 6947 ATCGATTATAGAAAATGGAACAA-CATGCAAAGAGACAAAGCAACCAAACCGACATTCAC 7005 || ||||| ||| |||||||| ||| |||||||| |||| | ||| || ||||| Sbjct 30839 ATTAATTATGAAAAGTGGAACAATCAT-CAAAGAGATGAAGCGAACAATCCTGTTTTCAC 30781 Query 7006 TGTCATGG 7013 ||||||| Sbjct 30780 AGTCATGG 30773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37225742165976