Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_033006.1 Length=11332 Score E Sequences producing significant alignments: (Bits) Value seq1802 210 2e-50 >seq1802 Length=132586 Score = 210 bits (232), Expect = 2e-50 Identities = 848/1303 (65%), Gaps = 66/1303 (5%) Strand=Plus/Minus Query 6097 ACTTGGCCGACTCCTAAGCAAATAAAAGATTTTGGAGACAAATGGCATTTGCTTCCATTG 6156 || ||||| ||||| || || | ||| ||||| || |||||||| ||||| ||| Sbjct 31359 ACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATACTCTTCCTTTG 31300 Query 6157 GAAAAATGCTTCGATATACCAGATCTAATAGATCCCAGTAATATATACTCTGACAAGAGT 6216 |||| || || || || || ||| | || ||||| ||| || || |||| || || Sbjct 31299 AAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGC 31240 Query 6217 CATTCGATGAATCGTTCTCAAGTCATTTCCTATATAAA-TAAGAGATCACCAGGGTCT-- 6273 ||||| || | | || || ||| ||| | | ||||| | | | | | | Sbjct 31239 CATTCAATCACTTAATC---AGCAATT--CTAGAGCATGTAAGAAAATATCCGAATATTC 31185 Query 6274 --ATCCCCACTAAGAAAGTACTAGAAACTATGATCAATAGCCCTGCCACCGATTGGAAAG 6331 ||||| | ||||| |||||||| ||| | ||||| || || || || || |||||| Sbjct 31184 CGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAA 31125 Query 6332 AGTTTTT-AGAGCGTATCGATAAAAGAGGATTAGACTGGGAAGAATTGATTATAGGATTA 6390 ||||| | || | || || | || |||||| |||| | | |||| |||||| Sbjct 31124 CCTTTTTGAAAGAGG-TCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTA 31066 Query 6391 AAAGAGAAGGAAAGAGAACTAAAGGAGGAT-GGTAGATTCTACTGC-CTAATGTCCTGGG 6448 | |||||| || || | || || || |||||||| | ||| || ||||||||| Sbjct 31065 CGGGGGAAGGAGCGAAAAATTAAA-AGAATAGGTAGATTTTT-TGCTCTTATGTCCTGGA 31008 Query 6449 CCTTGAGGGAATATTTTGTCGTCACTGAGTATTTGATTAAATTACATTTTATTCCTCTTT 6508 || || || ||||| || | || | |||||||||||| | |||||| | || | | Sbjct 31007 AATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGT 30950 Query 6509 TTAAGGGTCTGACTGTCGCTGATGACATGACAACACTAATCAAGAAGATGATGGATAATT 6568 || ||| ||||| | || |||||| | | || || | ||||||||| | |||| || Sbjct 30949 TTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTT 30890 Query 6569 CTTCAGGACAAGGATTAGATGATTATTCCAGAGTTTCTTA----TGCGAACCATTTAGAT 6624 | || ||||| ||||||| ||| || | | | | ||| || ||| | || Sbjct 30889 CGAATGGTCAAGGGTTAGATGGATAT----GAATATATAACAATTGCTAATCATATTAAT 30834 Query 6625 TATGAGAAGTGGAATAACTATCAGCGTATAGAATCCAACGGGCCTACATTCAGAGTAATG 6684 ||||| |||||||| || |||| | ||| | ||| ||| |||| ||| ||| Sbjct 30833 TATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATG 30774 Query 6685 GGACAGTTTTTGGGTTATCCTAACCTAATATACAGAACTCATGAATTCTTTCAAAAATCT 6744 ||||| ||||| || |||||||| | || | |||| ||||||||||| ||| | Sbjct 30773 GGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGT 30714 Query 6745 GTGATCTATTATACTCAAAGACCAGATCTAATGATGGTAAAAGACAATAAGATAATCAAT 6804 | || ||||| | | ||||| |||||||||| || | || ||| | | | Sbjct 30713 TTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAG-----AAGCTCGTTTAG 30659 Query 6805 AAAACAGAGA----ATGTAG-TAGTTTG--GGAA-GGGCAATTGGGTGGGTTCGAGGGAA 6856 |||||| ||| ||| || ||||| |||| || ||| || || | ||||| Sbjct 30658 AAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGC 30599 Query 6857 TTCGACAAAAGGGATGGAGTAT-ATTGA--ATGCACTTTCTGTGGAAAGAGAAAGCAGGA 6913 | ||||||| ||||| ||||| || | || || || |||||||| | | | Sbjct 30598 TGAGACAAAAAGGATGAAGTATCGTTTATTATAAACATT-----AAAAGAGAAGGTA--A 30546 Query 6914 ATTT--AAATACGAGAGTTACACTACTGGCACAGGGCGACAACCAAATAATATGTTCCAA 6971 | || |||||||||| ||| | |||| || || || || ||| | | ||| | | Sbjct 30545 AGTTGAAAATACGAGACTTAGTATCTTGGCGCAAGGAGATAATCAAGTTGTCTGTACTCA 30486 Query 6972 TTACAAATTACAACCATCTAGGGATTTAGC--TGAACTAAATATTAATTTA--GAGAGAA 7027 || ||| | | | | || ||| ||| |||||| | || ||| || | |||| Sbjct 30485 ATATAAACTGC-AGAAGATA-CGATCAAGCAATGAACT--AGATGAATGTATCCAAAGAA 30430 Query 7028 TTAAATCAAATAATGATTCTATAATGGCAGGTATAGACAAAGGTGTTAGTAAATTAGGAT 7087 ||| |||||| || || |||||| ||||| ||||| || | | | |||| Sbjct 30429 TTATATCAAACAACAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGAT 30370 Query 7088 TAAAGATCAATAAGGATGAGACAATGCAATCAGCAGACTTCCTGAGTTACGGCAAAGTGC 7147 | || ||| | ||||| || ||| | ||||| || | ||| ||| || || || | Sbjct 30369 TGTTAATTAATCAAGATGAAACCATGAAGTCAGCGGATTATTTGAATTATGGGAAGGTTC 30310 Query 7148 CAATTTTCAGAGGCAATATCAGACCTCTAGAAGAGAAGAGATGGTCAAGGTGTTCATGTG 7207 | ||||| | || || | | | | ||| || |||||||| || ||||| Sbjct 30309 CGATTTTTCGTGGGAAAGTAAAAGGGATGGAATCAAAAAGATGGTCCGAGT-AGCATGTA 30251 Query 7208 TCACGAATGATCAATTACCTACTTTAGGAAATGTCATATCATCTGTGAGC-TCTAATGCA 7266 | | || |||||||||||||| || | ||| | || || | || | | ||||| ||| Sbjct 30250 TGTCTAACGATCAATTACCTACAATAAGTAATATAATCTC-TATGGTATCTTCTAACGCA 30192 Query 7267 TTGACTATTTCTCATTTTTCTCCTTCTCCGATAAATACCATAATACATTATAATTTTGTT 7326 || || | || ||||| ||||| | || | || || |||||||||||| | Sbjct 30191 TTATCTGTAGGGCACTTTTCAGAATCTCCTTTGGATTCAATTATCCATTATAATTTTCTA 30132 Query 7327 GGTAATCT--TATTAGGAATCTGTTAGACCTACATAATCCTGC 7367 || ||| | | |||| | || ||||| || ||||| || || Sbjct 30131 GGAAATTTAGTTTTAGAAGTC--TTAGATCTTCATAACCCAGC 30091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36144231004544