Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_033034.1
Length=13000
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 197 1e-46
>seq1802
Length=132586
Score = 197 bits (218), Expect = 1e-46
Identities = 965/1507 (64%), Gaps = 45/1507 (3%)
Strand=Plus/Minus
Query 7477 TCCTGGTGTATTACAGTTCATTCAGGCATTGGGGACATCCCTTTATAGATACACTCGCCG 7536
|| || ||| |||| | ||||| || |||||||| ||||| ||| | || || |
Sbjct 31603 TCTTGTTGT-TTACGGATCATTTAGACATTGGGGGCATCCGTTTCTTGACTATCTACAAG 31545
Query 7537 GATTAGAGAAGTTATA----CACACAAGTTACATGCGAAAAAGATATTGATGAATCTTAT 7592
|| | | |||||| | || |||| || | | |||| ||| |||| | |||
Sbjct 31544 GACTCAAAAAGTTACATGAACAAACAACTTTAAAG--AAAACGAT--TGATCGAAGATAT 31489
Query 7593 GCCGAAATGTTAGCAAGTGACTTAGCTTATATTGTACTTGAAGAC-CAATTCAAGaaaaa 7651
|| | ||||||||||||||||| ||||||| ||||||| |||||| | |||||
Sbjct 31488 GCGCAGGCATTAGCAAGTGACTTAGCACATATTGTG-TTGAAGAATCAATTCGACAAAAA 31430
Query 7652 gaaaaaaTGGTTTGTCAACTTGGAAGAACTCCCACGAGACCATCACTTGTATCCCTTTGT 7711
||| | |||| || | | | | | | ||| || | | ||| || |
Sbjct 31429 GAAGATTTGGTCAGTTGAAACCAATCTATTGCGAAAAGATCACCCTCTATATGACTCAAT 31370
Query 7712 CAAATCACAA-ACCTGGCCTACTGCCAATATTATTGAG-GATTTTGGAGACAATTGGCAT 7769
| ||| || || ||||||||| ||| | | || || ||||| || | ||||||
Sbjct 31369 TAC-TCAAAATACATGGCCTACT-CCATTTCAGATCAGAGACTTTGGGGATCAATGGCAT 31312
Query 7770 AAACTCCCATTGATTAAGGCGTTTGAGATCCCTGATGTTATAGATCCTTCCATTATATAT 7829
| || || |||| ||| ||||||||||| ||||| || |||||| | || |||
Sbjct 31311 ACTCTTCCTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTAT 31252
Query 7830 TCCGATAGAAGTCATTCAATGAATAGAAGTGAGATTATCAACCATTTAAACAAGAATCCC 7889
| |||| ||| |||||||| | | | | ||| | | ||| ||| || ||||
Sbjct 31251 GCTGATAAAAGCCATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCG 31192
Query 7890 ACAAAACCAATTCCCACaaaaaaaGTGTTAAAAACCTTATTGAGTGAACCCGCTACTGAC 7949
| | || || || |||| || || || | || || | | ||||| || ||
Sbjct 31191 AATATTCCGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAA 31132
Query 7950 TGGAAAGAATTTTTAAAAGCAATTAATGATGTCGGATTATCCTGGGATGATTTGGTCATC 8009
|||||| ||||| |||| | |||||| || ||| | ||| || | || |||
Sbjct 31131 TGGAAAACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATC 31072
Query 8010 GGACTGAAAGAAAAGGAGCGGGAATTGAAAACAGCAGGACGTTTCTTTTCATTAATGTCT 8069
||| | | |||||||| || | |||| | ||| | || ||| | | |||||
Sbjct 31071 GGATTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCC 31012
Query 8070 TGGAAGCTGAGAGAATATTTTGTAATAACTGAATATCTCATAAAAACCTTTTATGTCCCT 8129
||||| | ||||| ||||| |||||||| ||||| | || ||| || ||| ||
Sbjct 31011 TGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCA 30954
Query 8130 CTTTTTTATGGATTAACAATGGCTGATGACTTAGTTACTGTTATGAGAAAAATGCTCGAA 8189
| |||| ||||| || ||||| |||||| | |||||| | | || ||| | ||
Sbjct 30953 TTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGAT 30894
Query 8190 ACATCATCTGGACAAGGATTGGATAATTATGATGTGAT--CTATTTGGCCAATCACATCG 8247
|| || ||| ||||| || ||| ||||| || | ||| || ||||| ||
Sbjct 30893 ACTTCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATT--GCTAATCATATTA 30836
Query 8248 ATTATGAGAAATGGAATAACCACCAACGACAAGCCTCGACTGGTCCTGTATTTAAGGTGA 8307
||||||| || ||||| || || ||| || | | ||| |||||| || | || |
Sbjct 30835 ATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCA 30776
Query 8308 TGGGACAATTCTTGGGTTACCCTAATTTAATTTACAGAACACACGAATTTTTTGAGAAAA 8367
|||||||||| || || || |||||||| || | |||| || ||||| || | |
Sbjct 30775 TGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGA 30716
Query 8368 GCCTGATTTATTATGGATATTATCCAGAATTATTGAGTGTTGTAAATGGGGAAGTTGCAA 8427
| | |||||||| || || || || ||| ||| || | | | | ||
Sbjct 30715 GTTTAATTTATTACAACAATAGACCTGATCTAATGACAGTTATAGAAGCTCGTTTAGAAA 30656
Query 8428 ATA---ATTCTGATAAACGAGTGTGCTGGAATGGCCAGGCAGGAGGGCTGGAAGGGTTAC 8484
| | | || || | || ||||||||||| || |||||||| || || ||| |
Sbjct 30655 ACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGA 30596
Query 8485 GTCAGAAGGGATGGAGCAT--TTTAAACTTATTGGTAATTAGGAGAGAAGG---AGCTCA 8539
| || || ||||| || || |||| ||| | |||| |||||||| || | |
Sbjct 30595 GACAAAAAGGATGAAGTATCGTTTA---TTA-TAAACATTAAAAGAGAAGGTAAAGTTGA 30540
Query 8540 TCGAAATACACAAGTGAG-ATGTCTAGCTCAAGGAGACAATCAGGTTATCTGCACCTTAT 8598
|||||| | | || || | | || |||||||| ||||| ||| |||| || ||
Sbjct 30539 ---AAATACGAGACTTAGTATCT-TGGCGCAAGGAGATAATCAAGTTGTCTGTACTCAAT 30484
Query 8599 ACAAACTTCAGAA-ATATCGAACACAAGAGGAACTCCAAGAAAACATCCAGCGGGTGGTT 8657
| ||||| ||||| ||| ||| || | ||||| | ||| ||||| | | |
Sbjct 30483 ATAAACTGCAGAAGATA-CGATCAAGCAATGAACTAGATGAATGTATCCAAAGAATTATA 30425
Query 8658 GATAATAATAATGTGATATTAAATAGAATTATCAAAGGAACTGAGAGATTAGGATTGATT 8717
|| || ||| ||| | | || || ||||||||| | || | |||||| |
Sbjct 30424 TCAAACAACAATAAAATAATGAGTAACATAGAAAAAGGAACTAATCGACTCGGATTGTTA 30365
Query 8718 ATAAATAGAGATGAAACAATGCAAAGT--GCTGATTACCTGAATTATGGCAAGATTCCCT 8775
|| ||| ||||||||| ||| |||| || ||||| |||||||||| ||| ||||
Sbjct 30364 ATTAATCAAGATGAAACCATG--AAGTCAGCGGATTATTTGAATTATGGGAAGGTTCCGA 30307
Query 8776 TCTTTAGGGGGAATTTGAGAAATCTTGAAACCAAACGATGGTCTAGAGTCACTTGCGTCA 8835
| ||| | ||||| | | | | ||| | ||| ||||||| |||| | || |
Sbjct 30306 TTTTTCGTGGGAAAGTAAAAGGGATGGAATCAAAAAGATGGTC-CGAGTAGCATGTATGT 30248
Query 8836 CCAATGATCAAATTCCAACTTTGGCAAACGTGATGTCTTCAGTTACAACAAATGCATTAA 8895
| || |||||| | || || | || | || ||| || | | || ||||||
Sbjct 30247 CTAACGATCAATTACCTACAATAAGTAATATAATCTCTATGGTATCTTCTAACGCATTAT 30188
Query 8896 CAGTGGCCCATTATTCAGACAATCCTCTAAACACAATATTTCATTTTAATTTCCTCGGGA 8955
| || | || | |||||| |||| | | |||| | |||| |||||| || || |
Sbjct 30187 CTGTAGGGCACTTTTCAGAATCTCCTTTGGATTCAATTATCCATTATAATTTTCTAGGAA 30128
Query 8956 ATTTTGT 8962
|||| ||
Sbjct 30127 ATTTAGT 30121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41481392594096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |