Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq1802 161 7e-36 >seq1802 Length=132586 Score = 161 bits (178), Expect = 7e-36 Identities = 518/798 (65%), Gaps = 13/798 (2%) Strand=Plus/Minus Query 5924 AAAACACTTGGCCCACTACACAAGTGATCAGAAATTTTGGAGATAATTGGCATAAACTTC 5983 |||| || ||||| ||| || ||||||| | ||||| ||| | ||||||| |||| Sbjct 31364 AAAATACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATACTCTTC 31305 Query 5984 CCTTAAAGAAATGCTTCGACATTCCAGATGTCATAGACCCTTCCATTATTTACTCAGATA 6043 | || || || || || || || || ||||| || || ||| | || || | |||| Sbjct 31304 CTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATA 31245 Query 6044 AGTCTCATTCGATGACCAGAAAACAAGTTGTCAAACACTTGAGAACAAACCAGGGGGCAG 6103 | ||||| || || | | | || | | || | |||| | | | | Sbjct 31244 AAAGCCATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTC 31185 Query 6104 CAATACCTTCCATTAAGGTCCTTAGTACTTTATTAAAACAG-CCAGCGACTAATTGGCCC 6162 | || || || | ||||| || ||||| | || ||| || || || | ||| Sbjct 31184 CGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAA-CAGTCCCGCAACAGAATGGAAA 31126 Query 6163 AAGTTTTTGAAACAGGTTAATGACACAGGTATAT---CAGAAGATCATCTGATCATTGGA 6219 | ||||||||| |||| ||||| ||| || | ||| ||| | | ||| ||| Sbjct 31125 ACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATC---GGA 31069 Query 6220 TTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCACTTATGTCTTGG 6279 ||| | | || |||||| || ||||| | ||| || || ||||| |||||||| ||| Sbjct 31068 TTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGG 31009 Query 6280 GAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTACCTCTG 6339 || | ||||||||||| || || || | ||| | || ||| || ||||| || || Sbjct 31008 AAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTG 30951 Query 6340 TTCAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAAATTTTAGAGAAT 6399 || || |||| |||||||| || | | |||||| | || || ||||| | | Sbjct 30950 TTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACT 30891 Query 6400 ACAGAGGGACAAGGAGAAACAGGGTATGAGAATATCACGGTTTCAAACCATATAGATTAC 6459 | | || ||||| | || ||||| |||| || || | || ||||| |||| Sbjct 30890 TCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTAT 30831 Query 6460 GAGAAATGGAACAACCACCAAAGGAAAGAGGCCAATAATCCTGTGTTTGATGTAATGGGG 6519 || || |||||||| || ||||| | || || || |||||||| || || ||||| Sbjct 30830 GAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGA 30771 Query 6520 AAATTCCTTGGCTACCCCAACCTTATCTCACGTACCCATGAAATATTCGAAAAGTCCTGG 6579 |||| | || || || || | ||||| || ||||||||| | ||| || | | Sbjct 30770 CAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTA 30711 Query 6580 ATGTATTATAATCAGAGGGGAGATTTGATCGGAGTCAATAGAGATGGAGTGATATTCAAT 6639 || ||||| || | || ||| | || ||| || ||| | || || Sbjct 30710 ATTTATTACAACAATAGACCTGATCTAATGACAGT---TATAGAAGCTCGTTTAGAAAAC 30654 Query 6640 AAGGATAAAAACAAGAGAGTTTGTTGGATTGGGCAAGAAGGTGGACTAGAAGGATTGAGA 6699 || || | ||||| ||||| |||| ||| |||| ||| |||||||| || ||||| Sbjct 30653 AAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGA 30594 Query 6700 CAAAAGGGATGGAGTATC 6717 ||||| ||||| |||||| Sbjct 30593 CAAAAAGGATGAAGTATC 30576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35545880154876