Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_033070.1
Length=11145
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 161 7e-36
>seq1802
Length=132586
Score = 161 bits (178), Expect = 7e-36
Identities = 518/798 (65%), Gaps = 13/798 (2%)
Strand=Plus/Minus
Query 5924 AAAACACTTGGCCCACTACACAAGTGATCAGAAATTTTGGAGATAATTGGCATAAACTTC 5983
|||| || ||||| ||| || ||||||| | ||||| ||| | ||||||| ||||
Sbjct 31364 AAAATACATGGCCTACTCCATTTCAGATCAGAGACTTTGGGGATCAATGGCATACTCTTC 31305
Query 5984 CCTTAAAGAAATGCTTCGACATTCCAGATGTCATAGACCCTTCCATTATTTACTCAGATA 6043
| || || || || || || || || ||||| || || ||| | || || | ||||
Sbjct 31304 CTTTGAAAAAGTGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATA 31245
Query 6044 AGTCTCATTCGATGACCAGAAAACAAGTTGTCAAACACTTGAGAACAAACCAGGGGGCAG 6103
| ||||| || || | | | || | | || | |||| | | | |
Sbjct 31244 AAAGCCATTCAATCACTTAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTC 31185
Query 6104 CAATACCTTCCATTAAGGTCCTTAGTACTTTATTAAAACAG-CCAGCGACTAATTGGCCC 6162
| || || || | ||||| || ||||| | || ||| || || || | |||
Sbjct 31184 CGATCCCGTCAAAGAAGGTACTAGAGACTTTTATCAA-CAGTCCCGCAACAGAATGGAAA 31126
Query 6163 AAGTTTTTGAAACAGGTTAATGACACAGGTATAT---CAGAAGATCATCTGATCATTGGA 6219
| ||||||||| |||| ||||| ||| || | ||| ||| | | ||| |||
Sbjct 31125 ACCTTTTTGAAAGAGGTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATC---GGA 31069
Query 6220 TTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCACTTATGTCTTGG 6279
||| | | || |||||| || ||||| | ||| || || ||||| |||||||| |||
Sbjct 31068 TTACGGGGGAAGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGG 31009
Query 6280 GAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTACCTCTG 6339
|| | ||||||||||| || || || | ||| | || ||| || ||||| || ||
Sbjct 31008 AAATTAAGAGATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTG 30951
Query 6340 TTCAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAAATTTTAGAGAAT 6399
|| || |||| |||||||| || | | |||||| | || || ||||| | |
Sbjct 30950 TTTTCGGGATTGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACT 30891
Query 6400 ACAGAGGGACAAGGAGAAACAGGGTATGAGAATATCACGGTTTCAAACCATATAGATTAC 6459
| | || ||||| | || ||||| |||| || || | || ||||| ||||
Sbjct 30890 TCGAATGGTCAAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTAT 30831
Query 6460 GAGAAATGGAACAACCACCAAAGGAAAGAGGCCAATAATCCTGTGTTTGATGTAATGGGG 6519
|| || |||||||| || ||||| | || || || |||||||| || || |||||
Sbjct 30830 GAAAAGTGGAACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGA 30771
Query 6520 AAATTCCTTGGCTACCCCAACCTTATCTCACGTACCCATGAAATATTCGAAAAGTCCTGG 6579
|||| | || || || || | ||||| || ||||||||| | ||| || | |
Sbjct 30770 CAATTTTTAGGGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTA 30711
Query 6580 ATGTATTATAATCAGAGGGGAGATTTGATCGGAGTCAATAGAGATGGAGTGATATTCAAT 6639
|| ||||| || | || ||| | || ||| || ||| | || ||
Sbjct 30710 ATTTATTACAACAATAGACCTGATCTAATGACAGT---TATAGAAGCTCGTTTAGAAAAC 30654
Query 6640 AAGGATAAAAACAAGAGAGTTTGTTGGATTGGGCAAGAAGGTGGACTAGAAGGATTGAGA 6699
|| || | ||||| ||||| |||| ||| |||| ||| |||||||| || |||||
Sbjct 30653 AAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGA 30594
Query 6700 CAAAAGGGATGGAGTATC 6717
||||| ||||| ||||||
Sbjct 30593 CAAAAAGGATGAAGTATC 30576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35545880154876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |