Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_033103.1 Length=13161 Score E Sequences producing significant alignments: (Bits) Value seq1802 163 2e-36 >seq1802 Length=132586 Score = 163 bits (180), Expect = 2e-36 Identities = 478/726 (66%), Gaps = 19/726 (3%) Strand=Plus/Minus Query 7927 TGTTTTGAAATACCAGATATGATAGATCCATCAGTGATTTACTCAGATAGAAGTCACTCA 7986 |||||||| || || ||| |||| ||||| | || || | |||| ||| || ||| Sbjct 31293 TGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGCCATTCA 31234 Query 7987 ATGACTCGTGATGA--AATCATAAACCATTTAACAACAAACCCCGGTATGCCGATACCAT 8044 || ||| | || | ||| || | ||| ||| || | | || ||| ||||| || | Sbjct 31233 ATCACT--TAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGATCCCGT 31176 Query 8045 CACGGAAAGTCCTGACCACCTTACTGCATTCTGATACGACGGATTGGAAAGCTTTTCTGG 8104 || ||| || || || || | | | | || || |||||| | ||| || Sbjct 31175 CAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTTTTTGA 31116 Query 8105 AGAGAGTAGACAA--AT-ATGGATTAGATCTGAATGAGCTTGTCATCGGTCTCAAAGAAA 8161 | |||| | ||| || |||| ||||| | | | | ||||| ||||| | | | Sbjct 31115 A-AGAG--GTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGGGGGA 31059 Query 8162 AGGAGCGAGAAATAAAAAAGAAGGGACGGTTTTTCTCATTGATGTCCTGGAGTCTTCGAG 8221 |||||||| |||| |||| | || | ||||| | | |||||||||| | ||| Sbjct 31058 AGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAG 30999 Query 8222 ATTATTTTGTGGTGACTGAGTATTTAATAAAGAAACACTTTGTTCCACTATTCTATGGTC 8281 ||||||| || | || | ||||| || || || ||||| ||| | || | || Sbjct 30998 ATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGAT 30941 Query 8282 TGACAATGGCCGATGATCTCACGACCGTGATGAGGAAGATGATGGAGAATGCAAATGGAC 8341 |||| ||||| ||||| || | || || | | ||||||| | || | | | ||||| | Sbjct 30940 TGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTC 30881 Query 8342 AGGGTCTGGATGATTATAGCTATATTTCTATTGCTAATCACATTGATTATGAGAAGTGGA 8401 | || | |||| ||| ||||| | ||||||||||| ||| ||||||| ||||||| Sbjct 30880 AAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGA 30821 Query 8402 ATAATCACCAACGGTTGGAATCAACCGGACCTGTGTTTCGTGTAATGGGACAATTCTTAG 8461 | ||||| ||| | ||| | | | ||||| || || ||||||||||| |||| Sbjct 30820 ACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAG 30761 Query 8462 GTTATCCAAATTTGATCTATAGGACACATGAGTTCTTTCAACAATCTCTGATCTACCATG 8521 | ||||| |||||||||| | | || ||||| ||||| ||| | | || || | Sbjct 30760 GGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTACA 30701 Query 8522 GAGGTCGAGGGGATTTAATGACAGTCAGAGATGGGAAAATTGTGAATTC-AGGATCC--- 8577 | || ||| |||||||||| | ||| | || ||| | | || || Sbjct 30700 ACAATAGACCTGATCTAATGACAGTTATAGA--AGCTCGTTTAGAAAACAAAGACCCTAT 30643 Query 8578 -ACACGTGTGTGTTGGGAGGGACAAGCCGGTGGTCTAGAGGGGCTTAGACAAAAGGGATG 8636 | | || || ||| | || ||||| || || ||||||||||| |||||||| ||||| Sbjct 30642 GAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATG 30583 Query 8637 GAGTAT 8642 ||||| Sbjct 30582 AAGTAT 30577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41993254722012