Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_033103.1
Length=13161
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 163 2e-36
>seq1802
Length=132586
Score = 163 bits (180), Expect = 2e-36
Identities = 478/726 (66%), Gaps = 19/726 (3%)
Strand=Plus/Minus
Query 7927 TGTTTTGAAATACCAGATATGATAGATCCATCAGTGATTTACTCAGATAGAAGTCACTCA 7986
|||||||| || || ||| |||| ||||| | || || | |||| ||| || |||
Sbjct 31293 TGTTTTGAGATCCCCGATGTGATCGATCCTAGTTTAATCTATGCTGATAAAAGCCATTCA 31234
Query 7987 ATGACTCGTGATGA--AATCATAAACCATTTAACAACAAACCCCGGTATGCCGATACCAT 8044
|| ||| | || | ||| || | ||| ||| || | | || ||| ||||| || |
Sbjct 31233 ATCACT--TAATCAGCAATTCTAGAGCATGTAAGAAAATATCCGAATATTCCGATCCCGT 31176
Query 8045 CACGGAAAGTCCTGACCACCTTACTGCATTCTGATACGACGGATTGGAAAGCTTTTCTGG 8104
|| ||| || || || || | | | | || || |||||| | ||| ||
Sbjct 31175 CAAAGAAGGTACTAGAGACTTTTATCAACAGTCCCGCAACAGAATGGAAAACCTTTTTGA 31116
Query 8105 AGAGAGTAGACAA--AT-ATGGATTAGATCTGAATGAGCTTGTCATCGGTCTCAAAGAAA 8161
| |||| | ||| || |||| ||||| | | | | ||||| ||||| | | |
Sbjct 31115 A-AGAG--GTCAATGATCATGGTTTAGACCCGGAATATCTTGTTATCGGATTACGGGGGA 31059
Query 8162 AGGAGCGAGAAATAAAAAAGAAGGGACGGTTTTTCTCATTGATGTCCTGGAGTCTTCGAG 8221
|||||||| |||| |||| | || | ||||| | | |||||||||| | |||
Sbjct 31058 AGGAGCGAAAAATTAAAAGAATAGGTAGATTTTTTGCTCTTATGTCCTGGAAATTAAGAG 30999
Query 8222 ATTATTTTGTGGTGACTGAGTATTTAATAAAGAAACACTTTGTTCCACTATTCTATGGTC 8281
||||||| || | || | ||||| || || || ||||| ||| | || | ||
Sbjct 30998 ATTATTTCGTAATAAC--AATATTTGATTAAAGTGCATTTTGTGCCATTGTTTTCGGGAT 30941
Query 8282 TGACAATGGCCGATGATCTCACGACCGTGATGAGGAAGATGATGGAGAATGCAAATGGAC 8341
|||| ||||| ||||| || | || || | | ||||||| | || | | | ||||| |
Sbjct 30940 TGACTATGGCAGATGACCTTAATACTGTATTAAAGAAGATGTTAGATACTTCGAATGGTC 30881
Query 8342 AGGGTCTGGATGATTATAGCTATATTTCTATTGCTAATCACATTGATTATGAGAAGTGGA 8401
| || | |||| ||| ||||| | ||||||||||| ||| ||||||| |||||||
Sbjct 30880 AAGGGTTAGATGGATATGAATATATAACAATTGCTAATCATATTAATTATGAAAAGTGGA 30821
Query 8402 ATAATCACCAACGGTTGGAATCAACCGGACCTGTGTTTCGTGTAATGGGACAATTCTTAG 8461
| ||||| ||| | ||| | | | ||||| || || ||||||||||| ||||
Sbjct 30820 ACAATCATCAAAGAGATGAAGCGAACAATCCTGTTTTCACAGTCATGGGACAATTTTTAG 30761
Query 8462 GTTATCCAAATTTGATCTATAGGACACATGAGTTCTTTCAACAATCTCTGATCTACCATG 8521
| ||||| |||||||||| | | || ||||| ||||| ||| | | || || |
Sbjct 30760 GGTATCCTAATTTGATCTCTCGAACCCATGAATTCTTCCAATCGAGTTTAATTTATTACA 30701
Query 8522 GAGGTCGAGGGGATTTAATGACAGTCAGAGATGGGAAAATTGTGAATTC-AGGATCC--- 8577
| || ||| |||||||||| | ||| | || ||| | | || ||
Sbjct 30700 ACAATAGACCTGATCTAATGACAGTTATAGA--AGCTCGTTTAGAAAACAAAGACCCTAT 30643
Query 8578 -ACACGTGTGTGTTGGGAGGGACAAGCCGGTGGTCTAGAGGGGCTTAGACAAAAGGGATG 8636
| | || || ||| | || ||||| || || ||||||||||| |||||||| |||||
Sbjct 30642 GAAGAGGGTTTGCTGGAATGGTCAAGCAGGAGGACTAGAGGGGCTGAGACAAAAAGGATG 30583
Query 8637 GAGTAT 8642
|||||
Sbjct 30582 AAGTAT 30577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 41993254722012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |