Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_033705.1 Length=11731 Score E Sequences producing significant alignments: (Bits) Value seq1802 141 7e-30 >seq1802 Length=132586 Score = 141 bits (156), Expect = 7e-30 Identities = 312/458 (68%), Gaps = 11/458 (2%) Strand=Plus/Minus Query 6512 GATATTTTTCATTGATGTCCTGGAACCTAAGACTATATTTTGTTTTAACTGAATTTCTTA 6571 ||| |||| | | ||||||||||| ||||| ||||| || |||| ||| | | | Sbjct 31031 GATTTTTTGCTCTTATGTCCTGGAAATTAAGAGATTATTTCGTAATAAC--AATATTTGA 30974 Query 6572 TTAAACGATATTACGTTCCCTTATTTAGTGGATTGACAATGGCAGATGATTTTAACACCG 6631 ||||| ||| || || || ||| |||||||| ||||||||||| |||| || | Sbjct 30973 TTAAAGTGCATTTTGTGCCATTGTTTTCGGGATTGACTATGGCAGATGACCTTAATACTG 30914 Query 6632 TTATTCGA-AAGTTACTAGATCGGACCATGGGACAAGGAGGCCTGAC--ATACGAATATA 6688 | ||| | ||| | ||||| | | || ||||| | || ||| ||||||| Sbjct 30913 T-ATTAAAGAAGATGTTAGATACTTCGAATGGTCAAGG--GTTAGATGGATATGAATATA 30857 Query 6689 TCACATTAGCCAATCATTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAA 6748 | ||| | || |||||| || |||| || ||||| || |||| ||| |||| | Sbjct 30856 TAACAATTGCTAATCATATTAATTATGAAAAGTGGAACAATCATCAAAGAGATGAAGCGA 30797 Query 6749 ATAATCCTGTCTTTAAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGA 6808 | |||||||| || | ||| ||||| |||||||| |||| || ||| | | | | Sbjct 30796 ACAATCCTGTTTTCACAGTCATGGGACAATTTTTAGGGTATCCTAATTTGATCTCTCGAA 30737 Query 6809 CTCATGAATTCTTTGAGCAAAGTTTGATCTATTATAATGAAAGAACAGACTTGATGAGAG 6868 | ||||||||||| | ||||| || ||||| || | ||| | || | |||| || Sbjct 30736 CCCATGAATTCTTCCAATCGAGTTTAATTTATTACAACAATAGACCTGATCTAATGACAG 30677 Query 6869 TTAGAGGAGGT-GAGTTGATACCAACGA-CGGATG-CTAAAGTCTGTTGGAATGGTCAAT 6925 ||| || || | | | || | ||| || | ||| | || || |||||||||||| Sbjct 30676 TTATAGAAGCTCGTTTAGAAAACAAAGACCCTATGAAGAGGGTTTGCTGGAATGGTCAAG 30617 Query 6926 TGGGAGGATTAGAGGGCCTGAGACAGAAGGGGTGGAGT 6963 |||||| ||||||| |||||||| || || || ||| Sbjct 30616 CAGGAGGACTAGAGGGGCTGAGACAAAAAGGATGAAGT 30579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37420926132980