Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 376 2e-99 seq3 203 3e-47 >seq1 Length=37976048 Score = 376 bits (416), Expect = 2e-99 Identities = 1174/1799 (65%), Gaps = 39/1799 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || || || ||||| ||||||||| |||||| ||| || | | ||| ||||| || || Sbjct 148848 TCAACGGTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATACATCCCTGTT 148907 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || ||||| ||| | |||||||| || |||| || ||| | || || ||||| Sbjct 148908 TTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCA 148967 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 || || || ||||| || ||||| ||||| || | || ||||| || ||||| Sbjct 148968 GCTACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGCCATT 149027 Query 65258 TCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 | |||| | | || | ||||| |||||||| || |||||||| |||| | Sbjct 149028 TTAATGCAA-GTTTTCACTGATATTTCCCAGACCGTTTTGTACAGATTGCGTATGTGTTG 149086 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGA 65376 ||||| ||||| || | || | ||| ||| | || | || || ||| Sbjct 149087 CGGAATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTCATTTC 149146 Query 65377 CTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAA 65436 || ||| | |||| || | |||| | | ||| ||| |||| | ||||| || Sbjct 149147 ATCATCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCACTTGAAA 149206 Query 65437 CTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGT 65496 || || || || || | |||| |||| ||| || ||| ||||| || || || | Sbjct 149207 TTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTT 149266 Query 65497 GTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 |||||| || ||||||||||| || || |||||||| ||||| | | || || || || Sbjct 149267 GTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACG 149326 Query 65557 CAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGTC 65616 ||| |||| | | |||| || | | ||| |||| ||||||| || | || Sbjct 149327 CAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAA----TTCT-GTG 149381 Query 65617 GACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGAA 65676 | | ||| | ||||||||| | ||| || |||| | || |||| || | Sbjct 149382 GGCTTCCT-GTCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATA 149440 Query 65677 ACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATA 65736 | ||||| || || | || | | ||||| | || ||||| | ||||| Sbjct 149441 TGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATA 149500 Query 65737 AATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC 65796 |||||| || || || || |||| | | || || || || || || || | Sbjct 149501 AATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCG 149560 Query 65797 CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAA 65856 ||||| || |||| || |||| ||||| ||||| ||||| || ||||| || |||| Sbjct 149561 CATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGCAT 149620 Query 65857 ATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATT 65916 ||| || || | || || || ||||| ||||| ||||||||||| || |||| ||| Sbjct 149621 ATTAGATCGCTTTGCTTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATT 149680 Query 65917 GCGTGTCACCACATGCACGATACGTCGCAATTG-TTCGAAATCAAAATGTTTAGGACGAT 65975 || || || | | ||| || | | | |||| | |||| | | ||||| Sbjct 149681 CCGAGTAACAGTTTTGGC--TACCTC-CTTTAGCTTCG----CGAAATCGTATGTACGAT 149733 Query 65976 CGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTA 66035 |||| | |||||| || || || | || || || || || ||||| | Sbjct 149734 CGGGTTTT---------ACAAACATGTTTAGAGCGATCGAGGCCAGATTACACACAGCAA 149784 Query 66036 TCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGC 66095 | || || | | || || ||||||||||||||||| || || || || | Sbjct 149785 TTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTC 149844 Query 66096 CCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGC 66155 | | || ||||| |||||||| |||||||| ||||| ||||| | |||||| || | Sbjct 149845 CAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTC 149904 Query 66156 CGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC-GT-ACG 66213 | |||||||| || ||||| ||||||||| ||| | | | | ||||| ||| || || Sbjct 149905 CAGTCTCAACCTGCGACTCTATGATGGCGAACCACAAATCTTGCGCCTTAACCTGTCGCG 149964 Query 66214 T--ACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271 | | || ||| | ||| ||||| |||||| | || ||| ||||||||| Sbjct 149965 TGAAACG----ACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTGGAACTCCTCACCCCAT 150020 Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCA-ATCACCATCCTG-TT 66329 || |||| || ||||| | ||| || ||||| | ||| || | | || || Sbjct 150021 GTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTT--TGCTT 150078 Query 66330 CTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTT 66389 | ||||| |||| || | |||||| ||||| || |||||||| | || | || || Sbjct 150079 CGACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGA 150138 Query 66390 GCTCCTC-AATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCAT 66448 ||| || | ||||| || || | ||| | |||||||| || || |||||||| Sbjct 150139 CCTCTTCTTTTCCCGTG-TTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCAT 150197 Query 66449 GGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGA 66508 || |||| || || || || | || || ||| ||||| ||||| ||||| || Sbjct 150198 GGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGC 150257 Query 66509 GCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCG 66568 || ||||||| ||||||||| ||| ||||| | |||||| ||| | ||||| || || Sbjct 150258 GCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCCT 150317 Query 66569 TCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTC 66628 | || | |||| || | ||| || ||||| ||||| || |||||||||| Sbjct 150318 GCTATATATGTTCCTTTAGCTCTAATACAATGCACATTAAGACCTATGCCACCGGCCGAT 150377 Query 66629 TTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTG 66688 || ||||| ||||| | | || | | || || || ||| || || Sbjct 150378 TTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGAC 150437 Query 66689 ATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTG 66748 || ||||| ||| |||| || ||||| ||| | || || || | || | ||| Sbjct 150438 ATTGTCAGCAGGAAGCAGGACGACAGTTGTGGTCGTTGAGTTGCTGCAGCAAACATGGTT 150497 Query 66749 GGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCA 66808 || | |||||||||||||| | ||||| | ||||||||||| || |||||||| Sbjct 150498 GGCGAGGCGTGCGTAAAGTATCGCTCAGACAGCAAGTTGTACGTCTCAATTGCAGCATCA 150557 Query 66809 ATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 |||| | | ||||| || |||| ||| ||||| || | || ||| |||||||| || Sbjct 150558 ATGTCTGCACCATGTATGCCGATAGCAACACGCATGAGCATGTGTTGTGGCCGTTCTAC 150616 >seq3 Length=33601328 Score = 203 bits (224), Expect = 3e-47 Identities = 305/433 (70%), Gaps = 3/433 (1%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||||||||||||| | ||| |||||||| || ||||| ||||| | || | Sbjct 22123232 TGTTCAATGCCATCGAGACGCTGCCGTGTGTGAAGCGTAAGGCGGACTGGGCGATGAACT 22123291 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||| | | || || || | |||| || || | ||||||| Sbjct 22123292 GGATCTCGAGCAAGAAGGCCAACTACGGCGAGCGTATCGTGGCGTTCGCAGCTGTCGAGG 22123351 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | | || ||||| || ||||| || ||||| ||| ||||||| ||||| || |||| Sbjct 22123352 GCATCTTCTTCAGCGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 22123411 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | ||| |||| ||| |||||||||||| || ||||| || || ||||||| || |||| Sbjct 22123412 CGGGTTTGACGTTCTCCAATGAGTTGATCTCGCGCGATGAAGGTTTGCATTGCGACTTTG 22123471 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | | | | ||||| |||||| | | || ||| |||||||| || | Sbjct 22123472 CCTGTCTCATGTTCAA---GTATCTGATACAGAAGCCATCGCGCAAGCGTGTGACGGACA 22123528 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 || | || || ||||| | ||||| ||||| || ||||| | || |||| ||| Sbjct 22123529 TTATCCGGGATGCGGTTGCAATCGAGCAGGAGTTCCTGACCAAAGCACTGCCAGTCGATA 22123588 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | | ||||||||||| | ||| ||||| ||||| || || ||||| || || || ||| Sbjct 22123589 TGTTGGGCATGAATTGCGAACTCATGTCCCAGTACATCGAGTTTGTGGCGGATCGGCTGC 22123648 Query 61817 TGGTCGATTTGGG 61829 |||| || |||| Sbjct 22123649 TGGTGGAGCTGGG 22123661 Score = 176 bits (194), Expect = 4e-39 Identities = 205/274 (75%), Gaps = 6/274 (2%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| |||||||| ||||||||||| || ||||||||| | || || |||||||| |||| Sbjct 22122871 AGGCCGAAGCTTCTTTCTGGACGGTCGAAGAGGTCGATCTATCTAAGGACATGAAAGACT 22122930 Query 61166 GGGA-GCGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||| ||| | | |||||| | | || || || |||||| | || ||||||| Sbjct 22122931 GGGATGCGCTGAAGCCGAGCG---AGCGTCACTTTATCTCGCATGTGCTCGCCTTCTTTG 22122987 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| || || |||||||| || || ||| | | ||||| ||| |||||||| || | Sbjct 22122988 CCGCCTCCGATGGTATCGTGAACGAAAATCTGGTCGAACGGTTCAGCCAGGAGGTTCAGG 22123047 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 || ||||||| || |||||||| || |||||||| || ||||| || || ||| |||| Sbjct 22123048 TGACGGAGGCTCGCTGTTTCTATGGTTTCCAGATCGCTATGGAAAACGTGCACAGCGAGA 22123107 Query 61343 TGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 ||||| | || ||||| || ||||| |||| Sbjct 22123108 TGTACTCGCTGCTTATCGACACATACATTCGGGA 22123141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567026082640