Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq801 132 2e-28 >seq801 Length=13554 Score = 132 bits (146), Expect = 2e-28 Identities = 117/146 (80%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| ||||||||||| | ||||||||||||||| Sbjct 12692 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGAGGTAAACTCCTTCTAAAGCTAAAT 12751 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||| ||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 12752 ACCACCATGAGTCCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 12811 Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185 ||||||| ||| || |||||||| || Sbjct 12812 AGAGAGTCAAATAGTACGTGAAACTG 12837 Score = 118 bits (130), Expect = 4e-24 Identities = 92/110 (84%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 || |||||||||||||||||||||||||||| ||| ||||| ||| |||||| ||| || Sbjct 13445 TGCGACCCGAAAGATGGTGAACTATGCCTGATCAGGTTGAAGTCAGGGGAAACCCTGATG 13504 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 |||| || ||| ||||| ||||||||||||| |||| | ||||| ||| Sbjct 13505 GAGGACCGAAGCAATTCTGACGTGCAAATCGATTGTCAGAGTTGGGCATA 13554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079973959700