Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq224 78.8 3e-12 >seq224 Length=6006405 Score = 78.8 bits (86), Expect = 3e-12 Identities = 134/189 (71%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 198 AGTCCAGGT-CAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATG 256 ||| ||||| ||| |||| ||| |||| ||| ||||||| |||||||| || | | Sbjct 4943404 AGTGCAGGTACAGG-ATGTCGGTCGGCACGGTGTCGAGGAAGTTCCGGTCGTGCGACACG 4943462 Query 257 ATGATCATCAGGCTGGAACGCTGGGTCAG--GATATTT-TCCAGCCAGCGGATGGTGTTG 313 | | || | ||| || | || | |||| || ||||||||| ||| | ||| Sbjct 4943463 ACCAGCAGCGTCGTGG---GCCAGTTCTGCAGATAGTTCTCCAGCCAGATGATTGCCTTG 4943519 Query 314 ATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCC 373 |||||||| ||| |||||||||||||||| ||||| || || | ||| || || ||| Sbjct 4943520 ATGTCCAACATGTTCGTCGGTTCGTCGAGCAGCAGCAGCTCGGGCTTGGAGAAGAGGGCC 4943579 Query 374 TGGGCCAGC 382 |||| ||| Sbjct 4943580 CGGGCGAGC 4943588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881576443544