Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq801 352 9e-95 >seq801 Length=13554 Score = 352 bits (390), Expect = 9e-95 Identities = 362/466 (78%), Gaps = 18/466 (4%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 10132 TATTTCTCGTCACTACCTCCCCGTGCCGGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 10073 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 10072 TTGGATGTGGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTA 10013 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| | |||||||||| || ||| |||||||| | ||||||||||||||| ||||| Sbjct 10012 CCCGTCGCAACCATGGTAGTCCTCTACACTACCATCAATAGTTGATAGGGCAGACATTTG 9953 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGAT-----TCGTTA---AGTTATTA--TGAA 272 || || | ||| | | | || |||| |||| || ||| || | | | | || Sbjct 9952 AAAGATCTGTCGTCAGTGCGAGACCATACGATCGGCATCATTATCCAGATTTCAACTCAA 9893 Query 273 TCACCAAGGAGCCCCGAAGGGCG-TTGGTT-TTTTATCTAATAAATACACCCCTTC--CG 328 | || || || ||| ||||| || || ||| ||||||| | |||| ||| || Sbjct 9892 --AGCACGGCCCCGCGAGGGGCGCGTGATTGGTTTGACTAATAAGTGCACCAGTTCCGCG 9835 Query 329 AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAA 386 | ||| || || |||||||||||||||||| || |||| |||||||| ||| | Sbjct 9834 AGGTCCTGGCAATTTGCATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTAACTTTG 9775 Query 387 GGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT 446 | | ||| |||| ||| ||| | || |||||| | || |||||||| ||||| Sbjct 9774 GCGATGATCTTGTAAATTATAGCTGTTATACTGAGCCTTATGCGGTTTCACTTTATAGGA 9715 Query 447 TGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492 |||| |||||||||||||||||||||| ||||||||| ||| ||| Sbjct 9714 AGCTTGTACTTAGACATGCATGGCTTAACCTTTGAGACGAGCGTAT 9669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510381663744