Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq472 446 1e-120 seq328 242 3e-59 >seq472 Length=2253382 Score = 446 bits (494), Expect = 1e-120 Identities = 1215/1842 (66%), Gaps = 35/1842 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| |||||||||||||| | |||| |||||| | |||||||||||||| || Sbjct 817651 TCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCCAGTT 817710 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||| |||||||||| ||||| | | || |||| || ||||| Sbjct 817711 TTCAATCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCC 817770 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCCAT 65256 || || || || || ||||| || ||||||||| |||| ||||||||||| ||||| Sbjct 817771 GCGACGTGAATGTTGAACGATTGCGACTGATCGATA-AACGCGCCACGATCTGCGGCCAT 817829 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || |||| |||||||| || || ||||||||| || | || Sbjct 817830 TTTGATGC-ACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTCCT 817888 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGAT-TACGCAT 65373 || || || |||| | |||| || ||| | | || | | || | | | | Sbjct 817889 GCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCATGT 817948 Query 65374 CGAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 ||| || ||||| ||||| | | | | || || | | ||| | || | || | Sbjct 817949 CGAGATC---CCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 818005 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| ||||| || || | || | ||| |||||| || || || |||| Sbjct 818006 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 818065 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || ||||||| |||||||| || || || || || ||||| || || | || || || | Sbjct 818066 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 818125 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 | || | |||| | | | || || | ||| ||| |||||||||||| | | Sbjct 818126 TGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACA---GATC-- 818180 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 ||||| ||| | |||||| || | |||| | | || | || |||| || Sbjct 818181 CGTCGGT-TCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCT 818239 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 | | | |||||| ||| || ||| | | |||||| | || || ||| | Sbjct 818240 CGTACGTCTCGTACGGTCCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGT 818299 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 | || ||||| ||||| || || |||| || | | ||||| ||||| |||||||| | Sbjct 818300 AGTAGATGGTTTCGAATATTTGTTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGG-A 818358 Query 65793 TACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || | |||||||| || | ||||||| || || || || || ||||| || | || Sbjct 818359 TAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGG 818418 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| |||||| || | ||||| || || || |||||||||| ||| || || ||| Sbjct 818419 CGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTC 818478 Query 65912 AAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAGG 65970 | |||||| || || | ||| | | | || | | | || ||| | |||| | Sbjct 818479 AGATTGCGCGTTACGGTCTTAGCGACTTCCTT-CAGCTTTGCAAAGTCATAC-GTTTTG- 818535 Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030 || | | |||||| || | ||| | || || || ||||| || Sbjct 818536 ----TCTTGCTTT---------ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATAC 818582 Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTAT 66090 |||| ||| || | | ||||| ||||| || ||||||| || || || Sbjct 818583 CGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTGCACAAGTTGGAACATTTGAT 818642 Query 66091 GGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGG 66150 |||||| | |||||| || ||||| || |||||||| ||||||||||||| ||||||||| Sbjct 818643 GGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGG 818702 Query 66151 AGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT 66210 |||||| || || || || || ||||| || ||| ||| | | ||||||||| Sbjct 818703 TACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTG 818762 Query 66211 ACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCA 66270 || | | ||| | ||||| ||| || | ||||| ||| ||||| Sbjct 818763 CCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCA 818822 Query 66271 TACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTC 66330 || || || | ||||| | ||| || |||||||| ||| | | | || Sbjct 818823 GGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTC 818882 Query 66331 TACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTG 66390 ||||| |||| || || || ||||||||||| ||||| || | || ||||| || Sbjct 818883 CACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGAC 818942 Query 66391 CTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 |||||| ||||| ||||| || ||||| ||||| || || || ||||||| || Sbjct 818943 CTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGG 819002 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 || || ||||||||||| | || || ||| |||||| || |||||||| || || Sbjct 819003 CTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGC 819062 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 ||||||| |||| |||| |||||| || || ||||| ||| | || || || ||| Sbjct 819063 CGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGATATCCCGTTCGTACCGGA 819122 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 |||| | ||| || || ||| ||| || ||||| || || |||||||||| ||| Sbjct 819123 GATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTT 819182 Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 || || ||||| | || || | | ||||| |||||| || | || Sbjct 819183 TGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACAT 819242 Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750 ||||| ||| |||| || ||| ||||| | ||||| |||| || | || || Sbjct 819243 GGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTGGCCGCCGCAAACATAGTTGG 819302 Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810 | ||||| ||||||||| | |||| |||||| |||||||| | ||||| || Sbjct 819303 CGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGAT 819362 Query 66811 GTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAG 66870 || |||||||| || || | ||| |||||||| | || || || || ||||| | Sbjct 819363 GTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGAT 819422 Query 66871 CCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 ||||||| | || |||||| || ||||||| ||| || Sbjct 819423 TTTTCCCTTGATCTTCAGTAAGTATGATCGTTCCAAGGTTTT 819464 >seq328 Length=4755327 Score = 242 bits (268), Expect = 3e-59 Identities = 217/269 (81%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||| |||| Sbjct 1648813 AGGCGGAAGCTTCCTTCTGGACGGTGGAAGAGGTTGATCTGTCCAAGGACATGAAGGACT 1648872 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 ||||| || | | |||||| ||| || |||||| || ||| |||| ||||||| Sbjct 1648873 GGGAGTCGCTGAAACCGAGCG---AACGCCACTTCATTTCCCACGTGCTGGCCTTCTTTG 1648929 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| || ||||||||||| || |||||| | ||||||| ||| ||||||||||| | Sbjct 1648930 CCGCGTCCGACGGTATCGTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGG 1648989 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | |||||||||| || |||||||||||||||||||| ||||| ||||| ||| |||| Sbjct 1648990 TTACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGA 1649049 Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371 ||||| | || ||||| ||||||||| Sbjct 1649050 TGTACTCGCTGCTGATCGACACGTACATC 1649078 Score = 224 bits (248), Expect = 8e-54 Identities = 310/433 (72%), Gaps = 3/433 (1%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||||||||| ||| | ||| ||||||||||| ||||||||||| | || | Sbjct 1649209 TGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGCGGAAGGCGGATTGGGCGCTGAACT 1649268 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||| | ||||| || || | |||| || || | ||| |||| Sbjct 1649269 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCTTTCGCTGCGGTTGAGG 1649328 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || ||||| || || ||||| ||||| ||| ||||||| ||||| || |||| Sbjct 1649329 GTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 1649388 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || || |||||| || ||| |||| || |||||||| || |||| || || |||| Sbjct 1649389 CGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTG 1649448 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | || | ||||| ||||||||| | |||||| ||||||| ||| |||| Sbjct 1649449 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAGA 1649505 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 | | || || ||||| ||||| ||||| || ||||| | || |||| || Sbjct 1649506 TCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGATA 1649565 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | | |||||||| |||| || ||||||||||| ||||| ||||| ||||| || || Sbjct 1649566 TGCTGGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGCTTGC 1649625 Query 61817 TGGTCGATTTGGG 61829 || |||| |||| Sbjct 1649626 TGCTCGAGCTGGG 1649638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562117732960