Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq18 93.3 8e-17 >seq18 Length=4758701 Score = 93.3 bits (102), Expect = 8e-17 Identities = 177/258 (69%), Gaps = 17/258 (7%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG----------CTCGAATACA 123 ||||| ||||| ||||||||||| | |||||||| || | ||||| Sbjct 620300 TTTACCTTGAACAAATTAGAGTGCTTCAAGCAGGCTCATGAATATATGGCCGAGAATAAT 620359 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTT-CTATTTTGTTGGTTTCTAG---GACC 179 | |||||||||||| ||||| ||| | | | | |||| ||||||| || ||| Sbjct 620360 CTTGCATGGAATAATGGAATATGACCTTGGTCTACAATTTCATTGGTTTGTATACAGACT 620419 Query 180 --GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 | |||||| |||| ||| | || ||||| | |||||| | |||||||||| Sbjct 620420 CAGAGGTAATGGTTAACAGGAGTGGTTGGGGGCATTAGTATTACGGCGCGAGAGGTGAAA 620479 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 ||| | || |||||||||| ||||||||||| ||| ||| ||||||||| Sbjct 620480 TTCGTAGACCGTCGTAAGACTAACTGAAGCGAAAGCGTTTGCCATGGACACTTTCATTAA 620539 Query 298 TCAGTGAACGAAAGTTAG 315 ||| ||||||||||||| Sbjct 620540 TCA-AGAACGAAAGTTAG 620556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915187452608