Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq19 513 1e-140 seq10 176 4e-39 >seq19 Length=3534686 Score = 513 bits (568), Expect = 1e-140 Identities = 1265/1902 (67%), Gaps = 65/1902 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 |||||||| ||||||||||| || | |||| |||||| | || ||||||||||| ||| Sbjct 2154487 TCGACCGTAAACTGGATCGCGTTCACTGCCGGCTTGGTGCGCAGGTAGTACATGCCCGTC 2154428 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || ||||| ||| | |||||||| ||||| | | || |||||||||||||| Sbjct 2154427 TTCAGGCCCATCTTCCAGCCGTAGAAATGAATCGACGTCAGCTTACCATAATTCGGCTCG 2154368 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACC-ACGATCTGCAGCCAT 65256 ||||| || || || |||||||| ||| || ||| |||| || |||||| || ||||| Sbjct 2154367 GCCACGTGAATGTTGAACGACTGCGACTGGTCAATG-AACGCCCCACGATCGGCCGCCAT 2154309 Query 65257 GTCAATGATACGACGTC----CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCT 65312 | |||||| |||| |||| || ||||| || |||||||||| | || | | Sbjct 2154308 TT---TGATAC-ACGTTTTCACCGAAATTTCCCAAACCGTCTTGTACAAGTCGCGGATGT 2154253 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 ||||| ||||| || | ||||| |||||| | || | ||| || || Sbjct 2154252 GCTGCGGAATTTCCTCGATCTTCTGGATGGAACCATTGTGCGCGAGGATGTTGTTTTTCA 2154193 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | || ||||| || ||||| | || | || | ||| ||| |||||| ||| | Sbjct 2154192 TTTCATCGTCCCACAGGCCTAAATCCGTCAGGTCCTGTAGCAAATGATGATTGACGACCT 2154133 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 |||||||||| ||||| ||||| || |||| ||| || ||| || || || || | Sbjct 2154132 GGAACTCGCCCGACAGCACACGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACT 2154073 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| | || || || || || || || ||||| ||||| | || | |||| Sbjct 2154072 CGTTGTTGCCCAAGATCTGCGCGGTGGAAGCGGTCGGCATCGGAGCCAACAGAAGCGAGT 2154013 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTT 65610 | || | || | | | |||| || | || | |||||||||||| ||||| Sbjct 2154012 TGCGAACGCCATGCTTGGCAATCTTTTCCTTCAGCACACCCCAGTTCCACAGCTCGGTG- 2153954 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | | |||||| || | ||||| | || | ||| |||| || Sbjct 2153953 ---GGGGTCTT----GTTCCACATGTCGTACTGCAGCATCCCCTTGCTGACCGGACTGCC 2153901 Query 65671 GAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGC 65730 | | | |||||| || || ||| || | ||| |||| ||| | ||| | Sbjct 2153900 CTCGTACGTCTCGTACGTGCCATCGCGGGCGGCCAGCTCACAACTGGCCTCCAAAGCGCC 2153841 Query 65731 AAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGG 65790 | || ||||| ||||| || || | || || | | ||||| || ||||||||||| Sbjct 2153840 GTAGTAGATGGTTTCGAAGATTTGTTGGTTCAGCTTCTGCGCCTCTTCACTCTCGTACGG 2153781 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 | |||||| | || | ||||||| || || || || |||||||| || | || Sbjct 2153780 GTAGCGCATCAGAATGAACGCATCGGCCATGCCCTGCACGCCGATACCGATCGGCCTGTG 2153721 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 |||| ||||| || |||| || || || |||||||| || || ||||| || || Sbjct 2153720 GCGCATGTTGGAGCGCTTCGCTTCCGGCACCGGGTAGTAGTTAATGTCGATGATTTTGTT 2153661 Query 65911 CAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTTAG 65969 || ||||| || || | ||| | | | || || ||| |||||| Sbjct 2153660 CAGGTTGCGCGTGACAGTCTTGGCGACTTCCTT-CAGTT--TCG----CAAAAT------ 2153614 Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029 || || | | |||| | ||| ||| || || || | ||||| || ||||||| Sbjct 2153613 --CGTACGTGTGGTCCGG-CTTCACGAACATGTTCAGCGCGATTGATGCCAGATTGCAGA 2153557 Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089 | ||||| || || | | |||||||| ||||| |||||||| || ||| | Sbjct 2153556 CCGCTATTTCATCCTTGGACGAGTACTCGACGATTTCCGTGCACAGGTTTGAGCACTTGA 2153497 Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149 | ||||||| |||||||| || |||||||||||||| ||||||||||||| |||||||| Sbjct 2153496 TTGTGCCCACGTTCTGTTGGTTGCTCTTGCGATTGCACGCATCCTTGTACAGCATGTACG 2153437 Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCG 66209 | ||| ||||| || || || || |||||||| ||| ||| | | ||||| ||| Sbjct 2153436 GGACGCCCGTCTCGACCTGCGATTCGATGATGGCAAACCACAGATCCTGAGCCTTGACCT 2153377 Query 66210 TACGTA----CCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 ||| | ||| || |||| ||||| | |||||| | ||| || || Sbjct 2153376 GACGGATAAACCGGCCCTCCTTC----TCGTAGCCTGTGTAGAGCTTTTCAAACTCCTCT 2153321 Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325 ||||| || ||||| | ||||| | ||| || ||||||| ||| |||| Sbjct 2153320 CCCCACGAATCCGACAGTCCGGGACAATCGTGCGGGCACATCAAGCTCCA-----CATCT 2153266 Query 66326 TGTTCTACACGACGC-----ATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC 66380 |||| | |||||| || || ||||| || | ||||||||||||||| | |||| Sbjct 2153265 CGTTCGCCTCGACGCGCTGCATGAACAGATCCGGCACCCAGAGGGCGTAGAACATGTCGC 2153206 Query 66381 GTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGG 66440 | || || |||||| ||||| || || || ||||| ||||| || | ||| Sbjct 2153205 GCGCGCGGACCTCCTCCTTGCCGGTGTTCTTCTTCAGATCGAGAAACTCGAACACATCGC 2153146 Query 66441 CATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGA 66500 | ||||| || || |||||||| ||||||| || || ||| ||| || ||||||| Sbjct 2153145 CGTGCCACGGCTCGAGGTAGATCGCGAACGCACCGGGGCGCTTGTTGCCGCCCTGGTCGA 2153086 Query 66501 CGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCAT 66560 | ||||| ||| |||||| |||| |||| |||||| || |||||||| || | || | Sbjct 2153085 CATAGCGCGCGGTGTTGTTGTAGACGCGCAGCATCGGCACCAGCCCGTTGGAAATTCCGT 2153026 Query 66561 TGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCAC 66620 | ||||| ||||| | ||| || || || ||| ||||||| ||||| || | Sbjct 2153025 TCGTGCCTGCGATGTACGTTCCCTTCGCACGGATGCAGTGGACATTCAAGCCAATGCCTC 2152966 Query 66621 CGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTCAATGGA 66678 |||||| |||||| || |||| | | || || || | | ||||| || ||| Sbjct 2152965 CGGCCGACTTCGAAAT--CAGCGCGCACTGCTTCAACGTGTCGTAAATGCCCTCGATGCT 2152908 Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738 ||| || || ||||| || |||| ||| ||| || || |||| || |||| Sbjct 2152907 GTCGTCCGACATCGTCAGCAGAAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCAGCCGC 2152848 Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG--GCGAGACATGTA-ATTGTACGTCTC 66795 || | || || | || |||||||||||| | ||||| ||| ||| || ||||| Sbjct 2152847 AAACAATGTAGGCGACGCATGCGTAAAGTAACGCTCCGAGA---GTAGATTATAGGTCTC 2152791 Query 66796 GATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTG 66855 ||| | ||||| || | ||||| ||||| |||| || |||||||| | | || Sbjct 2152790 TATGGCCGCATCGATATCCTCGCCGTGAATGCCGATGGCTACGCGCATCAGCATATGCTG 2152731 Query 66856 AGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGAT 66915 || || || || | | ||||||| | || | ||| || |||||||| || |||| Sbjct 2152730 CGGTCGCTCAACGATCTTGCCCTTGATCTTCAGCAGGTACGACCGTTCCAGCGTTTTGAA 2152671 Query 66916 ACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 ||||| || ||| ||||||| | ||| | |||||| Sbjct 2152670 GCCAAAATAATTGTAGCCGAAATCGCGATCATATATGATGGC 2152629 >seq10 Length=7496699 Score = 176 bits (194), Expect = 4e-39 Identities = 202/269 (75%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| ||||| || |||||||| |||||||||||||| |||| || |||||||| || | Sbjct 496142 AGGCCGAAGCATCGTTCTGGACCGTGGAGGAGGTCGACCTGTCGAAGGACATGAAAGATT 496083 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 ||||| || | | |||| ||| | |||||||| || ||| | || || || | Sbjct 496082 GGGAGGCGCTGAAGCCGAG---TGAGCGTCATTTCATCTCGCACGTGCTCGCATTTTTCG 496026 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| |||||||| ||||| || |||||| | | ||||| ||| ||||||||||| | Sbjct 496025 CCGCGTCGGACGGCATCGTTAACGAGAATCTGGTCGAACGGTTCAGCCAGGAGGTGCAGG 495966 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | | || ||||| || |||||||| |||||||| || ||||| || |||||| |||| Sbjct 495965 TAACCGAAGCGCGCTGCTTCTACGGATTCCAGATCGCGATGGAAAACGTCCACAGCGAGA 495906 Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371 |||| | || ||||| ||||||||| Sbjct 495905 TGTATTCGCTCCTGATCGACACGTACATC 495877 Score = 167 bits (184), Expect = 2e-36 Identities = 296/431 (69%), Gaps = 3/431 (1%) Strand=Plus/Minus Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 |||||||||||||| || | ||| |||||| ||| || || ||||| | || ||| Sbjct 495766 TTCAATGCCATCGAAACACTGCCGTGCGTGAAGAAGAAGGCCGACTGGGCGCTGAACTGG 495707 Query 61459 ATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGT 61518 ||| | || | | ||| | ||||| || || || | || ||||| | |||||||| Sbjct 495706 ATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTGGTTGCGTTTGCCGCCGTCGAGGGC 495647 Query 61519 GTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCC 61578 | || || || || || ||||| || || ||| ||||||| || || || ||||| Sbjct 495646 ATCTTCTTTAGCGGGAGCTTCGCCGCCATTTTCTGGCTGAAGAAGCGGGGCCTGATGCCG 495587 Query 61579 GGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCT 61638 ||| |||||||| || ||| |||| || |||||||||||| |||| || || ||||| Sbjct 495586 GGTTTGACCTTCTCGAACGAGCTGATTTCGCGCGACGAGGGCCTGCACTGCGACTTTGCC 495527 Query 61639 GTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATT 61698 | || | ||||| || |||||| | ||| || || |||||| || Sbjct 495526 TGTCTGATGTTCAA---GTACCTGGTGCAGAAGCCGACGCGCGAACGTGTGACCAGCATC 495470 Query 61699 GTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTC 61758 | || || ||||| ||||| ||||| || || || | || | || ||| | Sbjct 495469 ATCCGCGATGCGGTGCTGATCGAGCAGGAGTTCCTCACGAAGGCGCTCCCGGTCGATATG 495410 Query 61759 ATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTG 61818 |||| ||||| |||| || ||||||||||| || || || || ||||| || ||| || Sbjct 495409 CTCGGTATGAACTGTGATCTGATGTCGCAGTACATCGAGTTCGTCGCCGATCGGCTGCTG 495350 Query 61819 GTCGATTTGGG 61829 || || ||||| Sbjct 495349 GTGGAGTTGGG 495339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397561357011440