Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 2e-12 seq19 86.0 3e-11 >seq9 Length=9206694 Score = 89.7 bits (98), Expect = 2e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 626264 ACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGGCTACAAC 626323 || |||||||| || ||||||||||||||||||||||| |||||| || |||||||| Sbjct 5240310 ACGCAGGTCGGTGCATGCATCGTCAACGAGGACAAGCGTGTCGTGGGCATAGGCTACAAT 5240251 Query 626324 GGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGG 626362 || || ||| |||||||| || || | ||||| ||| Sbjct 5240250 GGATTTCCGACTGGCTGCAGCGATGATGAGTTTCCGTGG 5240212 >seq19 Length=3534686 Score = 86.0 bits (94), Expect = 3e-11 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 21729 ATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAG 21788 |||| || ||||| || ||||| | || | ||| || || | ||||| |||||||| Sbjct 3008437 ATGAACTGAGCGATACGGTCGCCTTTTTTCACTTCGAAATCTAGCTCAGAATGGTTGAAC 3008496 Query 21789 AGCACCACCCCGACCTTGCCCCTATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAG 21847 || || || ||||| || |||| || | || ||||||||| ||||||||||| |||| Sbjct 3008497 AGGACGACTCCGACGTTTCCCCGGTA-GTCCTCGTCGACGACACCGGCGCCGACATCGAT 3008555 Query 21848 CCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAG 21893 || || | ||||| ||| || | ||||| || ||||| ||| Sbjct 3008556 GAAATTTTTGACGGCCAAACCGGAACGAGGAGCTACCCGGCCATAG 3008601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084701686421058