Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq10 107 3e-18 >seq10 Length=7496699 Score = 107 bits (118), Expect = 3e-18 Identities = 260/389 (67%), Gaps = 6/389 (2%) Strand=Plus/Minus Query 162452 GAATCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAG 162511 || |||| || ||| ||| |||||||| || || ||| || || ||||| | Sbjct 1111540 GATTCTATCAGGCGTCCACTTCCGAGCTTTACGGCAAGGTGGTGGAAACGCCACAGAATG 1111481 Query 162512 AAACCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGA 162571 ||| || || | ||||| || || || || | ||| ||||| || || | ||||| Sbjct 1111480 AAAAGACACCCTTCTATCCGCGCTCTCCGTACGCCTGTGCAAAACTGTACGGCTACTGGA 1111421 Query 162572 TCATCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATC 162631 || | | ||| ||| | ||| || ||||| ||||| | || || || ||||| | Sbjct 1111420 TCGTGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAATGGCATCCTGTTCAACC 1111361 Query 162632 ACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCC 162691 | || | ||| | ||||| | || ||||| |||||||| || | || | Sbjct 1111360 ATGAGTCTCCCCGCCGGGGAGAAAATTTTGTCACCCGCAAGATAACGCGCTCGGTGGCAA 1111301 Query 162692 GAATTAGTGTGGGACTCCAA-AGTGATCTACAACTTGGAAACCTCAATGCCCGA--CGTG 162748 |||| | || | || |||| | | | || || || ||| | | ||| |||| Sbjct 1111300 AAATTTCGCTCGGTCAACAGGAGTGCT-TGGAGCTGGGCAATCTCGA--CTCGAAGCGTG 1111244 Query 162749 ACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGC 162808 ||||||| ||||| | |||||||| ||||| |||||| ||||| | ||||| ||||| | Sbjct 1111243 ACTGGGGCCACGCGCAGGACTACGTCGAGGCCATGTGGCTGATGATGCAGCAGGAGAAAC 1111184 Query 162809 CAGATGATTATGTGATCGCAACTGGTGAG 162837 | || |||| ||| ||||| || |||||| Sbjct 1111183 CGGAAGATTTTGTCATCGCCACCGGTGAG 1111155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691447350117960