Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_033192.1 Length=10072 Score E Sequences producing significant alignments: (Bits) Value seq13 1159 0.0 >seq13 Length=5662806 Score = 1159 bits (1284), Expect = 0.0 Identities = 1518/2092 (73%), Gaps = 81/2092 (4%) Strand=Plus/Minus Query 7954 CCTATTCCATATTTGTTGCCTTAAATCCGACAAAACTACGCTGGTCTGTCTTTGGTGCTG 8013 |||| ||||| || | |||||||||||||| ||||| || ||| || |||| ||||| Sbjct 583237 CCTACTCCATCTTCTTAGCCTTAAATCCGACTAAACTGCGGTGGAGCGTTTTTGCTGCTG 583178 Query 8014 CAGTTTTGATAGTCGTTGCGATACCTTCGCTTCCCGTCTTCTATCATATCATCACTGCAG 8073 ||||||| | || |||| ||| | ||| | || || || || || || | || || | Sbjct 583177 CAGTTTTAGTCGTGATTGCTATATCGTCGTTACCAGTGTTTTACCACATAACTACGGCTG 583118 Query 8074 TCGCGCTAGTGTTCTATCTCGCGCTTCAGCGAATTGAACACAAGGCTCTCACGGTGTTCA 8133 | || || ||||| || | || | || |||| |||||||||||| | | || || | Sbjct 583117 TAGCACTTGTGTTTTACTTGGCATTACAAAGAATAGAACACAAGGCTTTGGCTGTCTTTA 583058 Query 8134 TCTATGTCGCTGGAATGGTGTTGTATACTAGCGCTGTTGTCGTGTCGGTTGCGACAGCTG 8193 ||||||||| ||| |||||| | ||||| || | |||||| || || ||| || || Sbjct 583057 TCTATGTCGGTGGTATGGTGCTATATACCAGTGTTGTTGTTGTCTCAGTTAGCACTACTA 582998 Query 8194 GTGCTGGTAAGCGCAACTCCACTGGTGCACCGTAGGA--TACA-GCCCTTGGTGACGTTC 8250 || | ||| ||| ||||| | || |||||| ||| |||||||||||| ||| Sbjct 582997 ---CTAGCAAGGGCAGCTCCAACAG--CAA-GTAGGAATTACCCGCCCTTGGTGACCTTC 582944 Query 8251 TCGGGGGTGGAGCCCGAGTACACTTTGCTCGTCGACCATCTTCCGGTGGTCACTGAGGGC 8310 || || | | || |||| ||||||||||||||||||||| || ||||| ||||||||| Sbjct 582943 TCCGGAATACAACCGGAGTTCACTTTGCTCGTCGACCATCTACCAGTGGTGACTGAGGGC 582884 Query 8311 GAGAAGTGTCTTGTCGCAGTAGCCGGTGACTCGTGTGAGCTGCCGGACTATTGTGGTCAA 8370 ||||| || || ||||||| || || || || ||||| | || ||||| || |||||| Sbjct 582883 GAGAAATGCCTGATCGCAGTTGCGGGAGAGTCTTGTGACTTACCTGACTACTGCGGTCAA 582824 Query 8371 GTCGAGAGGTTTCACATGAAGGTTCAGGATCTGCTACTTGTCATCTGTGCGGGTCATCAT 8430 || || |||||||||||||| || || | || | |||| | || || ||||||||| Sbjct 582823 GTAGAAAGGTTTCACATGAAAGTGCAAAACATGTTGGTTGTGGTTTGCGCAGGTCATCAT 582764 Query 8431 GTGTTACCTGGGCACAAATCGGATATCGAAATTTTTAGAGCCTACTCATTGGATGCCCGC 8490 ||||||||| ||||||||| || | ||||||| | ||| || || |||||||| || Sbjct 582763 GTGTTACCTAAGCACAAATCCGACGTGCAAATTTTCAAAGCGTATTCCTTGGATGCGCGT 582704 Query 8491 GGTGAGTTTATTCCCGTTGAATTATATTTCATCGACGTTTACTCATTGGACAGGAAGTAC 8550 || | || || || || ||||| |||||||| || || ||||| ||||| || ||| Sbjct 582703 GGGCACTTCATACCGGTAGAATTGTATTTCATTGATGTCTACTCTTTGGAGAGAGTCTAC 582644 Query 8551 CGTTATTCGGTCGTGCTTCCGTGGGCGATGCTGTCTAAATTGGTCGTCAAGACAGCTGTG 8610 ||||| || |||||| | || |||||||||||||||||| |||| || | ||||| ||| Sbjct 582643 CGTTACTCTGTCGTGTTGCCTTGGGCGATGCTGTCTAAACTGGTGGTTAGAACAGCAGTG 582584 Query 8611 CAACACAGTTTTTATGTGGACAAGGATCTTCGGATCTGTCGCCGTGGTACGTATTTAAGG 8670 |||||||||||||| || ||||| || || ||||| || || || ||||| ||| | | Sbjct 582583 CAACACAGTTTTTACGTAGACAATGACCTACGGATTTGCCGTCGGGGTACATATCTCCGT 582524 Query 8671 TCTCTGACCAGACTACTGTCACGTAGAATTCTTAATTCGGAAAAGCAACTCTACCCTGGT 8730 ||||| || ||| | || || || ||||| | || ||||| || |||||||| | || Sbjct 582523 TCTCTTACAAGATTGCTTTCTCGGAGAATATTGAACTCGGAGAAACAACTCTATGCCGGA 582464 Query 8731 GACGCGCCTTTTCTTGAAGCGAATTCACTTCGGGGAGCATCATGCCGCCCGTCCGGTACA 8790 ||||| || ||||||||||| || || | || || || || Sbjct 582463 GACGCTCCCTTTCTTGAAGCTAACTCTATCCGTGGGGCTTC------------------- 582423 Query 8791 CACGAACCCTATTCCTGCACTGATCTCATAGTCGTTAATGAGACCTATGCATTGTGCTCG 8850 | ||||| |||||||| || |||||||||||||||||| |||| || Sbjct 582422 -------------CGTGCACAGATCTCATCGTTGTTAATGAGACCTATGCACTGTGTTCC 582376 Query 8851 TCGGTTTGGACGCAATTGCATCCCGGTGCGTGCCCGATGGATCGGCAATATCGTCGTGGT 8910 || |||||||| ||| ||||||| || ||||| || ||||| || || ||||||||||| Sbjct 582375 TCAGTTTGGACACAAATGCATCCGGGAGCGTGTCCCATGGACCGACAGTATCGTCGTGGG 582316 Query 8911 GAATTCGGTTTCGAAGATGTTTGTACTAACATCACAGTCCTGGAGAAGAAGAAGGCTTTC 8970 || |||| ||| ||||| | ||||| ||||| || || | ||| |||| || | || Sbjct 582315 GAGTTCGCTTTTGAAGACATCTGTACCAACATTACGGTGATCGAGCAGAAAAAATCCATC 582256 Query 8971 GGTGAAGATCCAGACGACGGGTGGCTTCAAAGATCTTTGAAACAAGTCGTCAATTGGTTG 9030 | ||||||| ||| ||| | || || || | ||||| ||||| ||||||||| Sbjct 582255 ---CAGGATCCAGGTGACAATTGGTTGCAGAGGTCACTTAAACAGGTCGTAAATTGGTTG 582199 Query 9031 ACCACGAAGATTGATGACTTTGCCGAGTTTATCGAGGGGTTGTTTTTGAAACTACTCGAG 9090 || || |||||||||||||| ||||| ||||| ||||||||| |||| | | ||| Sbjct 582198 GTGACAAAAATTGATGACTTTGCGGAGTTCATCGAAGGGTTGTTTCTGAAGTTGGTGGAG 582139 Query 9091 AAAGTTATAGCTTTTATGTTTTCACAGTTAGAAGTTCTTGATTCCCTGGTGGAATTTGTG 9150 ||| | || || ||| ||||||| | | ||| | | ||||| || | ||||| || Sbjct 582138 AAAATCATCGCGTTTGTGTTTTCGAAACTCGAAATATTAGATTCGATGATTGAATTCGTT 582079 Query 9151 GACTCGCGGTATGTAGTGTTTGAGCTAATGGTTGTATCGTTCATCATCTGTTATAGATCC 9210 ||||| |||| | ||||||||||| || || | || ||||| |||||||| | || Sbjct 582078 GACTCCAGGTACATGGTGTTTGAGCTCCTGATTTTGTCTTTCATAGTCTGTTATCGCTCG 582019 Query 9211 AACCTACCTGCAGCTTTGATTTTCGTAGTTATCTTC---GGAGTCACCTGCGGTTACGAT 9267 ||| || |||| || |||| || |||||| || ||||| ||| ||||| || Sbjct 582018 AACTTATCTGCCGC---GATTCTCTGTGTTATCATCTATGGAGTTGTCTGGGGTTATGAC 581962 Query 9268 CGGACACGTGATTTCAGACTCCTCCCAGAACTCAAAGCTCTGTTGCTATGGTCGGGATA- 9326 |||| ||| |||||||| ||| | | | |||| | || ||||||| | || Sbjct 581961 CGGAGTTATGACTTCAGACTGCTCACGCAGTTGAAAGACATATTCCTATGGTTCGATTAG 581902 Query 9327 AATCTATTATGTTAAAT--GTTTCGCCTAAGCATCATACCAATTAATTACAGATTTGATT 9384 |||| ||||||||||| | || |||||||| |||| | |||| | || || Sbjct 581901 TATCT-TTATGTTAAATCCGGTT-GCCTAAGCTTCAT---ATTTAAGT-GTCTTTCAATC 581848 Query 9385 ATT-TC-GAGTTTTCAATTAAATTAAATTGGGTCACTA-CTTGTTCCGAATATTAAAGTG 9441 ||| || ||||||||| | || | | || |||| | |||||| Sbjct 581847 ATTGTCAAAGTTTTCAAGT--------TTCG--TAGTAGCTTG------CTTTTAAAGGA 581804 Query 9442 AAGTTACCATGAGTTTCATCAAGGATTTGTTCGCCCGCTTCCTGGAGTTGTTCCGCGGTA 9501 | | |||||| || ||||| || |||| | || ||| ||||| ||||||| || | Sbjct 581803 ATCGCATCATGAGCTTTATCAAAGAGCTGTTTGAACGTTTCTTGGAGCTGTTCCGTGGGA 581744 Query 9502 GTATCTCGAATGAGATCGTCCGTGAACTAGTCCGCTTGCAGCGGGAGCGTGCAATTACCA 9561 | ||||| | || || || |||||||| || || ||||||| ||||| || | |||| Sbjct 581743 GCATCTCACAGGAAATTGTTCGTGAACTCGTTCGTCTGCAGCGAGAGCGAGCGTTGACCA 581684 Query 9562 TCGCTCGCACCGTCCTTACGGACGTGTACGTTTACGATGGTAAGGCGTACTTCCGGACTG 9621 |||| ||||| || ||||| || |||||||| || |||||||| |||| ||| |||| Sbjct 581683 TCGCGCGCACTGTGCTTACAGATGTGTACGTGTATGATGGTAAAGCGTTTTTCAAAACTG 581624 Query 9622 CCGAAGTGAGACGTCATGAGAACATTTACTATCAATATAAGGATGGAAAATGTGCAGTGC 9681 | || || || |||||||||||| | |||||||| | ||||||||| ||||||||||||| Sbjct 581623 CTGAGGTCAGGCGTCATGAGAACGTCTACTATCAGTGTAAGGATGGTAAATGTGCAGTGC 581564 Query 9682 TGGAGGAGTCAATCCAGAAGGTTGTTCGTACCTGCTCTGCGTACTCTCGTTTCACGAGTG 9741 |||||||||| ||||||| || || || ||||| |||| ||| |||| || || || | Sbjct 581563 TGGAGGAGTCGATCCAGAGAGTGGTCCGCTCCTGCGCTGCCTACACTCGCTTTACCAGCG 581504 Query 9742 ATTTAATCGTCGAGGACGATATTGGAGTTTTAGTTCCGCTTGAGGTTTGCTTTATCAAAA 9801 || | | ||| ||||| | ||||| || | || |||||||||||||| |||||||||| Sbjct 581503 ATCTGGTTGTCCAGGACAACATTGGTGTCCTGGTCCCGCTTGAGGTTTGTTTTATCAAAA 581444 Query 9802 CTCAAGCGAACGTTGATCTTGCACTTTCGCCGGCGAATTTGGAAGATCGTGTTGCAGCGA 9861 ||||||| || ||||||| |||| || ||||| | |||||||||||||| || | Sbjct 581443 CTCAAGCCAATCGCGATCTTGTGGTTTCACCTGCGAAACTAGAAGATCGTGTTGCTGCTA 581384 Query 9862 TGCGTAAATTCGTTCGCGATTACGACGCTGCTCACTCACCACCGGCCCCAGCTCAGGGTG 9921 ||||||| ||||||| || |||||| || |||| || |||||||| |||||||| | Sbjct 581383 TGCGTAAGTTCGTTCAGGACTACGACCTAGCAAACTCGCCTCCGGCCCCTGCTCAGGGCG 581324 Query 9922 TGGTGAG---TCATCCGCCGAGACCCGCATCTCGTAAGATGTGAGTCTCGCCGGAGAGCC 9978 || ||| | | || |||||| || |||| | ||| |||| ||||||||| Sbjct 581323 CGGCGAGTTCTAACCCACCGAGAATTCCACACCGTAGGGTGTAGTTCTCTTCGGAGAGCC 581264 Query 9979 GACGGTTGAATATAGGTACCTAGTACCGGGCCGAGACGACGACCGTTGTATA 10030 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 581263 GACGGTTGAATATAGGTACATAGTACCGGGCCGAGACGACGACCGTCGTATA 581212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32114704663184