Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq25975 399 2e-106 seq22281 201 9e-47 >seq25975 Length=7706 Score = 399 bits (442), Expect = 2e-106 Identities = 1204/1838 (66%), Gaps = 41/1838 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| |||||||||||||| | |||| |||||| | | ||| |||||||| || Sbjct 3704 TCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCCAGTT 3645 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||| | |||||||| ||||| | | || | || || || || Sbjct 3644 TTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTAGTTGGGTTCC 3585 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 || || || ||||| ||||| || ||||||||| |||| ||| ||||| || ||||| Sbjct 3584 GCGACGTGAATATTGAACGATTGCGACTGATCGATA-AACGCACCGCGATCCGCTGCCAT 3526 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || | || |||||||| || || ||||| || || | || Sbjct 3525 TTTGATGC-ACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGCGAATTTCTT 3467 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATG-CGAT-TACGCAT 65373 || || |||||| | || | ||| ||| | | ||| || | | | || Sbjct 3466 GCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTCATAT 3407 Query 65374 CGAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 ||| || ||| || |||| | | | |||| || | | || | || | || | Sbjct 3406 CGAGATC---CCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACCACCT 3350 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 | ||||| || || || || || | || | ||| |||||| ||| || || |||| Sbjct 3349 GAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGATT 3290 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || ||||||| ||||||||||| || || || || ||||| || || | || || || | Sbjct 3289 CATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 3230 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTAT 65612 | || | |||| | | | || || | ||| || ||||||||||| | | | Sbjct 3229 TGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAGC---TCA- 3174 Query 65613 CGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGA 65672 |||| | ||| | |||||| || | |||||| | || |||| |||| ||| Sbjct 3173 -GTCGGC-TCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCT 3116 Query 65673 GGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAA 65732 | | | |||||| ||| || ||| | | |||||| | || ||||| | | Sbjct 3115 CGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCGA 3056 Query 65733 AATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCA 65792 |||| ||||| ||||| || || | || || | | ||||| ||||| |||||||| | Sbjct 3055 AATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGG-A 2997 Query 65793 TACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 || | ||| | || || | ||||||| || ||||| || ||||||||||| || || Sbjct 2996 TAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGG 2937 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| ||||| || | ||||| || ||||| ||||| |||| ||| || || ||| Sbjct 2936 CGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTC 2877 Query 65912 AAATTGCGTGTCACCACATGCACGA--TACGTC-GCAATTGTTCGAAATCAAAATGTTTA 65968 | |||||| || || | | ||| | | || || ||| | |||||| | |||| Sbjct 2876 AGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGC--TTGGTA-AAATCATACGTTTTA 2820 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 || | | |||||| || | |||| || || || ||||| Sbjct 2819 ------TCTTGCTTT---------ACAAACATGTTCAAAGCAATCGAGGCCAGATTGCAC 2775 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 || |||| ||||| | | |||||| ||||||||||||||||| || || Sbjct 2774 ACCGCTACTTCGTCCTTCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTA 2715 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 ||||| || | |||||| |||||||| || |||||||||||||||||||||| |||||| Sbjct 2714 ATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTAT 2655 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || ||| || || || || ||||| ||||| ||| ||| | | |||| || ||| Sbjct 2654 GGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTGCTTTGACC 2595 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 || | | ||| | ||||| ||| || | ||||| ||||||| Sbjct 2594 TGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCC 2535 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || | ||||| ||||| | ||||||||||||||| ||| ||| | Sbjct 2534 CACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCC 2475 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| ||| || ||||| |||||||| || |||||||| | ||||| || || Sbjct 2474 TCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGG 2415 Query 66389 TGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 ||| || |||| ||| ||||| | ||||| ||||| || | || ||||||| Sbjct 2414 ACCTCTTCCTTGCCAGTG-TTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCA 2356 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 |||||||| ||||||||||| | || | |||| ||| || || || ||||| || Sbjct 2355 CGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCG 2296 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || ||||||| | || |||| |||||| || | ||||| || | || || ||||| Sbjct 2295 TGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCC 2236 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | |||| | ||| || || || ||| || ||||| ||||| |||||||||| Sbjct 2235 GGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGA 2176 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 ||| || || ||||| | || || | | || || |||||| ||| | Sbjct 2175 CTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGA 2116 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 |||||||| || | || ||| || || || | || || || | || | ||| Sbjct 2115 CATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAACATGGT 2056 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 |||| ||||| |||||||| | ||||| ||| ||||| ||||| | ||||| Sbjct 2055 CGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTTCGATCGCTGCATC 1996 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 |||||||| || || || |||| || |||||||| | | || || || || || Sbjct 1995 GATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTCGCTCAAC 1936 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCA 66905 | | |||| || | | ||||| || ||||||| Sbjct 1935 AATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCA 1898 >seq22281 Length=11977 Score = 201 bits (222), Expect = 9e-47 Identities = 210/270 (78%), Gaps = 8/270 (3%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 ||||||| ||||| |||||||||||||||||||| ||| ||||||| || ||||| |||| Sbjct 3680 AGGCGGAGGCTTCGTTCTGGACGGTGGAGGAGGTTGATCTGTCCAAGGATATGAAGGACT 3621 Query 61166 GGGA-GCGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 |||| ||| | | |||||| ||| || |||||| || ||| | || ||||||| Sbjct 3620 GGGATGCGCTGAAACCGAGCG---AACGTCACTTCATTTCCCACGTGCTTGCCTTCTTTG 3564 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAA 61281 ||||||| || || ||||| || |||||| | ||||||| ||| || |||||||| || Sbjct 3563 CCGCTTCCGATGGCATCGTGAACGAGAATCTGGTGGAACGCTTTAGC-CAGGAGGTACAG 3505 Query 61282 GTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAG 61341 || |||| || || ||||||||||| ||||||||||| ||||| || || ||| ||| Sbjct 3504 GTAACGGAAGCACGCTGTTTCTACGGGTTCCAGATTGCGATGGAAAACGTGCACAGCGAG 3445 Query 61342 ATGTACAGTGTTCTCATCGATACGTACATC 61371 |||||| | || ||||| || |||||| Sbjct 3444 ATGTACTCACTGCTGATCGACACTTACATC 3415 Score = 185 bits (204), Expect = 7e-42 Identities = 304/435 (70%), Gaps = 5/435 (1%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||| ||||||||||| ||| | ||| |||||| ||| || || ||||| | || | Sbjct 3303 TGTTTAATGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAACT 3244 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| |||| | | ||||| || ||||| || | |||| || || | ||||| | Sbjct 3243 GGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGAAG 3184 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || ||||| || || || | || || ||| | ||||| ||||| || |||| Sbjct 3183 GTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATGC 3124 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || || |||||| || ||| |||| || |||||||| || |||| || || || | Sbjct 3123 CGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACTTCG 3064 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | || | ||||| ||||||||| | |||||| ||||||| ||| || | Sbjct 3063 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGACA 3007 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 || |||| || ||||| ||||| ||||| || |||| | || ||||||| | || Sbjct 3006 TTATTCGCGATGCGGTTGTGATCGAGCAGGAGTTCTTGACGAAGGCACTGCCCGT-TGAC 2948 Query 61757 -TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 | | |||||||| || | || ||||||||||| || || ||||| || || ||| || Sbjct 2947 ATGCTTGGCATGAACTGCGATCTGATGTCGCAGTACATCGAGTTTGTGGCTGATCGTTTG 2888 Query 61816 TTGGTCGATTTGGGT 61830 || |||| ||||| Sbjct 2887 CTGCTCGAGCTGGGT 2873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397420851262160