Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3350 80.6 4e-13 seq2155 77.0 5e-12 seq769 77.0 5e-12 >seq3350 Length=1252 Score = 80.6 bits (88), Expect = 4e-13 Identities = 166/239 (69%), Gaps = 20/239 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| |||||| ||| ||| |||| |||||| || |||||||| |||| | Sbjct 1220 GTACAAAGGGCAGAGACGTAATCAGCGCTAGCTA-ATGACTAGCACTTACTAGAAATT-C 1163 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 | ||| | | | || ||||| | | ||| | | |||| |||| |||| Sbjct 1162 CAGGTTCATGGGGACCA-TTGCAGTCCCCAATCTTACTAA--ATGAGCATTTGGGTGATT 1106 Query 120 ACCCGGACCTGTCGG----------CCA--AGGTGATAGACTCGTTGAATACATCAGTGT 167 |||| ||| |||| ||| ||| || | || || || || ||| Sbjct 1105 TCCCGTCCCTCTCGGAATGGGGGCGCCATAAGGCGAGA-ACACGCTGCTGCTCACATTGT 1047 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 ||| ||||||| ||||| |||||||||||||||||| |||||||||| | ||||| ||| Sbjct 1046 AGCACGCGTGCAGCCCACAACATCTAAGGGCATCACGGACCTGTTATCG-CTCAATCTT 989 >seq2155 Length=1334 Score = 77.0 bits (84), Expect = 5e-12 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 || |||||| ||||||| ||||| |||||||||||||||||| |||||||||| | |||| Sbjct 98 CATTGTAGCACGCGTGCAGCCCACAACATCTAAGGGCATCACGGACCTGTTATCG-CTCA 156 Query 222 AACT 225 | || Sbjct 157 ATCT 160 >seq769 Length=1300 Score = 77.0 bits (84), Expect = 5e-12 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 || |||||| ||||||| ||||||||||| |||||||||||| |||||||||| | |||| Sbjct 7 CATTGTAGCACGCGTGCAGCCCAGAACATTTAAGGGCATCACGGACCTGTTATCG-CTCA 65 Query 222 AACT 225 | || Sbjct 66 ATCT 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751923354515