Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq8573 86.0 1e-14 >seq8573 Length=2140 Score = 86.0 bits (94), Expect = 1e-14 Identities = 142/200 (71%), Gaps = 10/200 (5%) Strand=Plus/Plus Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTA----TTTTGTTGGTTTCTAG--GACC- 179 |||||||||||| ||| | ||| | |||| | ||| |||||||| || |||| Sbjct 1 GCATGGAATAATGGAACATGACCT-CGGTCTGACTGGTTTCGTTGGTTTGTAATAGACCA 59 Query 180 -GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 | ||||||||||| || |||||||||| | ||||| | ||||||||||| Sbjct 60 AGAGGTAATGATTAACAGAAGTAGTCGGGGGCATTGGTATTACGGCGCGAGAGGTGAAAT 119 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 || | || | ||| || ||||||||||| ||||||||| |||||||||| Sbjct 120 TCGTAGACCGTCGTAGGACCCACAGAAGCGAAAGCGTTTGCCAAGGATGCTTTCATTAAT 179 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||||||||||||| || Sbjct 180 CA-AGAACGAAAGTTAGAGG 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915103711808