Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq7901 78.8 1e-12 >seq7901 Length=80373 Score = 78.8 bits (86), Expect = 1e-12 Identities = 142/200 (71%), Gaps = 17/200 (9%) Strand=Plus/Minus Query 2 TACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTC--GTCATCTAAA 59 || ||||||||||| ||||||| ||||||| ||| |||| |||||| ||| || | Sbjct 40372 TAGCTGAAGCTTAGTGGCTTTTCCTGGAAGCGTGGTATCAGTCACTTCAGGTC-CGTAGA 40314 Query 60 AGATAACTCGTCATCAGCTCCCGGCCTT--AGAATCCCGGATTTACCTAAGATTCCAGCC 117 ||||| |||| || |||| || |||| ||||||| |||| ||| ||| Sbjct 40313 ----CCCTCGTTATCACTTCTCGGCGTTAAAGAAGGGCGGATTTGCCTACCCTTCACGCC 40258 Query 118 TACCACCTTAAACTTGGACAA--CCAAC--GCCAAGCTGGCCTAGCCTTCTCCGTCCCTC 173 |||| ||| ||| | | | ||||| ||| |||| |||| ||||||||||||| Sbjct 40257 TACCGGCTTGAAC--GACCTATTCCAACAGGCC--GCTGACCTAACCTTCTCCGTCCCCA 40202 Query 174 CATCGCATTAACCAGAAGTA 193 ||||||| || || ||||| Sbjct 40201 CATCGCACTACACAAAAGTA 40182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518347163538