Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq7901 178 2e-42 >seq7901 Length=80373 Score = 178 bits (196), Expect = 2e-42 Identities = 193/254 (76%), Gaps = 9/254 (4%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||| || ||||| || |||| | || || ||| Sbjct 40634 CTTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTGGCAG 40576 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACC------ACCACC 114 | |||||||||| ||||||||||| || | ||||||||||||| | | || Sbjct 40575 AGTGCTGTGTTTTTGATAAACAGTCGCAGCCACCGATTCTCTGCGACCTGTCGTAGCTCC 40516 Query 115 AGCTCAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTT 174 ||| || | |||||||| | |||| ||||||||||||||||||| || ||| Sbjct 40515 --CTCCGCAGGGAGTTCACCACAACAGGCATACCTTCTCCCGAAGTTACGGTATCAATTT 40458 Query 175 GCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGT 234 ||||| |||||| || ||||| | | | |||||||| |||||| |||| |||||||| Sbjct 40457 GCCGAGTTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATTCTCATCCTGCCCACCTGT 40398 Query 235 GTCGGTTTACGGTA 248 |||||||| ||||| Sbjct 40397 GTCGGTTTGCGGTA 40384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694329225233