Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq769 138 2e-30 seq3350 123 4e-26 seq2155 120 5e-25 >seq769 Length=1300 Score = 138 bits (152), Expect = 2e-30 Identities = 97/111 (87%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 204 GTCGCGTTCGTTACCGGAATTAACCAGACAAATCATTCCACGAACTAAGAACGGCCATGC 263 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||||| |||| || | ||||||||||||||||||||| | |||| ||| Sbjct 264 ACCACTACCCTTAAGTTTGAGAAAGAGCTATCAATCTGTCTTACCTCAATA 314 Score = 77.0 bits (84), Expect = 5e-12 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||| ||||||| ||||||||||| |||||||||||| |||||||||| | |||| Sbjct 7 CATTGTAGCACGCGTGCAGCCCAGAACATTTAAGGGCATCACGGACCTGTTATCG-CTCA 65 Query 77 AACT 80 | || Sbjct 66 ATCT 69 >seq3350 Length=1252 Score = 123 bits (136), Expect = 4e-26 Identities = 94/111 (85%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||||| Sbjct 855 GTCGCGTTCGTTACCGGAATTAACCAGACAAATCATTCCACGAACTTAGAACGGCCATGC 796 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||| | |||| || | ||||||||||||||||||||| | ||| ||| Sbjct 795 ACCGCTACCCTTAAGTTTGAGAAAGAGCTATCAATCTGTCTTATCTCAATA 745 Score = 78.8 bits (86), Expect = 1e-12 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||| ||||||| ||||| |||||||||||||||||| |||||||||| | |||| Sbjct 1052 CATTGTAGCACGCGTGCAGCCCACAACATCTAAGGGCATCACGGACCTGTTATCG-CTCA 994 Query 77 AACTT 81 | ||| Sbjct 993 ATCTT 989 >seq2155 Length=1334 Score = 120 bits (132), Expect = 5e-25 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||| ||||||||| |||||||||||||| || ||| ||||| |||| ||||||||||||| Sbjct 295 GTCGCGTTCGTTACCGGAATTAACCAGATAATTCATTCCACGAACTTAGAACGGCCATGC 354 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCTCGATA 269 ||| | |||| || | ||||||||||||||||||||| | |||| ||| Sbjct 355 ACCGCTACCCTTAAGTTTGAGAAAGAGCTATCAATCTGTCTTACCTCAATA 405 Score = 77.0 bits (84), Expect = 5e-12 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||| ||||||| ||||| |||||||||||||||||| |||||||||| | |||| Sbjct 98 CATTGTAGCACGCGTGCAGCCCACAACATCTAAGGGCATCACGGACCTGTTATCG-CTCA 156 Query 77 AACT 80 | || Sbjct 157 ATCT 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796718788401