Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3293 257 3e-66 seq2251 255 1e-65 seq7191 223 6e-56 seq5990 134 2e-29 >seq3293 Length=1186 Score = 257 bits (284), Expect = 3e-66 Identities = 170/187 (91%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 145 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 203 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 204 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 263 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 264 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 323 Query 212 TGTGGTA 218 ||| ||| Sbjct 324 TGTAGTA 330 >seq2251 Length=1230 Score = 255 bits (282), Expect = 1e-65 Identities = 169/186 (91%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 1206 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 1148 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 1147 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 1088 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1087 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 1028 Query 212 TGTGGT 217 ||| || Sbjct 1027 TGTAGT 1022 >seq7191 Length=1094 Score = 223 bits (246), Expect = 6e-56 Identities = 160/183 (87%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | Sbjct 757 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACCTTCCCT-T 699 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | || | ||||||||||| ||| ||||| ||||| ||||||||||||| |||| Sbjct 698 GAAAGGTTAAACAATCCAACACTTGGTGAATTTTGCTTGACAATGATAGGAAGAGTCGAC 639 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| Sbjct 638 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGAGGCCACAAGCCAATTATCCC 579 Query 212 TGT 214 || Sbjct 578 GGT 576 >seq5990 Length=1236 Score = 134 bits (148), Expect = 2e-29 Identities = 77/79 (97%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCC 195 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 2 GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCC 61 Query 196 ACAAGCCAGTTATCCCTGT 214 ||||||||||||||||||| Sbjct 62 ACAAGCCAGTTATCCCTGT 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854310108576