Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq7901 374 2e-101 >seq7901 Length=80373 Score = 374 bits (414), Expect = 2e-101 Identities = 298/354 (84%), Gaps = 6/354 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| || ||||||||||| ||||||||||||||| ||||| Sbjct 37179 CTTTACAACCCGAAGGCCTTCTT-CAGACACGCGGCAT-GGCTGGATCAGGCTTGCGCCC 37122 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 37121 ATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 37062 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| | ||||||||||||||||| | ||| ||||||||||||||||||| |||||||| Sbjct 37061 TGTGGCGGATCATCCTCTCAGACCCGCTACTGATCGTCGCCTTGGTGAGCTCTTACCTCA 37002 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| ||| | ||| || ||||||||||| | | | |||||||||| Sbjct 37001 CCAACTAGCTAATCAGACGTCGGCCGCTCGAATAGCGCAAGGTCTTACGATCCCCTGCTT 36942 Query 241 TC--TCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACC 298 || || | || |||||||||||||||| | |||| || ||||||||||||||| Sbjct 36941 TCCTTCTCAAAG--CGTATGCGGTATTAGCTATCCTTTCGGATAGTTATCCCCCACTACT 36884 Query 299 AGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTCTCAAGAGAAGCAAGCT 352 |||| |||| | ||||||||||||||| |||| ||| || | |||||||| Sbjct 36883 CGGCACGTTCCGACGCATTACTCACCCGTTCGCCACTCGTCAGCGGAGCAAGCT 36830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071887214880