Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq7901 347 4e-93 >seq7901 Length=80373 Score = 347 bits (384), Expect = 4e-93 Identities = 420/562 (75%), Gaps = 20/562 (4%) Strand=Plus/Minus Query 40 GCTCTCACTTCCCGGCATTCGGAGTTTGGT-TGATTTCGGTAAGCTTGTGGGCCCCCTAG 98 |||| ||||| |||| |||| ||||||| || ||| | || | | |||||||| Sbjct 39716 GCTCGCACTTTCCGGTATTCAGAGTTTGCCATGGTTTGGTAAATCGCAATGACCCCCTAG 39657 Query 99 ACCATC-CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCG 157 |||| ||||||| |||| |||| ||| | || || || |||||||| ||||| Sbjct 39656 -CCATAACAGTGCTTTACCCCCGG-AAGTGATACATGAGGCACTACCTAAATAGTTTTCG 39599 Query 158 GGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCC 217 |||||||||||||||| | |||||| || ||||||||||||||||||||| |||||||| Sbjct 39598 GGGAGAACCAGCTATCTCCGAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCCC 39539 Query 218 TCAGTTTT-CAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTG 276 | |||||| |||| ||||||||||| |||||| || ||||| ||||| |||| Sbjct 39538 T-AGTTTTGCAACACTAGTGGGTTCGGACCTCCAGTGCGTGTTACCGCACCTTCATCCTG 39480 Query 277 CCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGA 336 |||||||||||||||| | ||||||||| | || ||| | |||||||||||||| Sbjct 39479 GCCATGGATAGATCACTCGGTTTCGGGTCTACGCCCAGCAACTAAGACGCCCTATTCGGA 39420 Query 337 CTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAG 396 |||| |||| ||||| || ||| | | |||||| || || || |||| || |||| | Sbjct 39419 CTCGGTTTCCCTACGCCTCCCCTATGC-GGTTAAGCTTGCTACTGAACG-TAAGTCGCTG 39362 Query 397 GCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGG 456 | |||| | ||||||| |||| |||||| | || || ||||| || | Sbjct 39361 ACCCATTATACAAAAGGTACGCAGTCACC----CCTTACGAG--------GCTCCCACTG 39314 Query 457 ATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTT 516 ||||| ||| |||||||||| |||||||||||||| || ||||| |||||| ||||| Sbjct 39313 TTTGTATGCATCCGGTTTCAGGTTCTATTTCACTCCCCTCCCGGGGTTCTTTTCGCCTTT 39254 Query 517 CCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCC 576 ||||||||||||| || | ||||||||| | |||||||||| ||| || |||||| Sbjct 39253 CCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTAGCCTTGGAGGATGGTCC 39194 Query 577 CGCCAGATTCACACGAAATTTC 598 | ||| |||| || ||||| Sbjct 39193 CCCCATCTTCAAACAGGATTTC 39172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817408770304