Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq7901 416 7e-114 >seq7901 Length=80373 Score = 416 bits (460), Expect = 7e-114 Identities = 351/416 (84%), Gaps = 13/416 (3%) Strand=Plus/Minus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || |||||||| |||| || ||| |||| |||| |||| ||||||| |||||||| | Sbjct 39558 CCTATCCACAGCTCATCCC-CTAG-TTTTGCAACACTAGTGGGTTCGGACCTCCAGTGCG 39501 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| ||||| || |||| |||| ||||||||| | |||||| |||||||| | Sbjct 39500 T-GTTACCGCACCTT-CATCCTGGCCAT-GGATAGATCACTCGGTTT-CGGGTCTACG-C 39446 Query 124 CCAGCGACTA-GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 ||||| |||| ||||||||| | |||||| ||| | ||||||||||||||| ||||||| Sbjct 39445 CCAGCAACTAAGACGCCCTATTCGGACTCGGTTTCC-CTACGCCTCCCCTATGCGGTTAA 39387 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 |||| || |||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 39386 GCTT-GCTACTGAACGTAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC--CT 39330 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 | ||||||||||| ||||| |||| |||||||||| ||||||||||||||||| ||| Sbjct 39329 TACGAGGCTCCCACTGTTTGTATGCATCCGGTTTCAGGTTCTATTTCACTCCCCTC-CCG 39271 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| Sbjct 39270 GGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGATCACGAGTATTTA 39211 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||||||||||||||||| |||| ||| |||| |||| ||| |||||| Sbjct 39210 GCCTTGGAGGATGGTCCCCCCATCTTCAAACAGGATTTCGCGTGTCCCGCCCTACT 39155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241469371264