Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq7901 185 2e-44 >seq7901 Length=80373 Score = 185 bits (204), Expect = 2e-44 Identities = 293/408 (72%), Gaps = 14/408 (3%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| ||||||||||| || || ||| | | Sbjct 40157 CGACTACGCTTTTCAGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCG 40098 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 |||| |||||| |||||| |||| || |||||| | ||||||||||| | Sbjct 40097 TAGGAAACCTTGGGCTTTCGGCGAGCGGGCTTTTCACCCGCTTTATCGCTACTCATGTCA 40038 Query 120 GCATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACC-ACTGACAC 177 |||||| |||| | || | ||||| || | | || | || |||||| || ||| Sbjct 40037 GCATTCGCACTTCTGAT-ATCTCCAGCATCCCTT-ACGAGACACCTTCACAGACCTACAG 39980 Query 178 GACGCTCCCCTACCCAACCACAC--AGGTTG----CCACAGCTTCGGCGGATAACTTAAG 231 ||||||||||||| | | ||| | || || ||||||||| | || || Sbjct 39979 AACGCTCCCCTACC-ATCTGCACTTACGTGCAAATCCGCAGCTTCGGTTATCAGTTTGAG 39921 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| ||||| || |||| | | ||| ||||||||||||||||||| ||||| || Sbjct 39920 CCCCGTTACATCTTCCGCGCAGGACGACTCGACCAGTGAGCTATTACGCTTTCTTTAAAT 39861 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC-T 350 |||||||||||| |||||||| |||||| ||||| || |||| || ||| |||| | Sbjct 39860 GATGGCTGCTTCTAAGCCAACATCCTGGCTGTCTGGGCCTTCCCACTTCGTTTACCACTT 39801 Query 351 GAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | | || || ||| ||||||||| | |||||| ||||||||||| Sbjct 39800 AACTGATCA-TTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 39754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177476104704