Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq7901 217 2e-54 >seq7901 Length=80373 Score = 217 bits (240), Expect = 2e-54 Identities = 222/290 (77%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||||| | |||| | |||||||||| ||| | Sbjct 37521 CCCACGCTTTCGTGCATGAGCGTCAGTGTCATCCCAGGGGGCTGCCTTCGCCATCGGTAT 37462 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| || |||||||||||||| ||||||| |||||||| ||||| |||| Sbjct 37461 TCCTCCGCATCTCTACGCATTTCACTGCTACACGCGGAATTCTACCCCCCTCTGACGCAC 37402 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || |||| || ||||||| |||| ||||| | ||||||||| |||| Sbjct 37401 TCTAGCTGTGCAGTCTCCAATGCAGTTCCCAGGTTAAGCCCGGGGCTTTCACATCAGACT 37342 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| | | | |||||| |||| ||| |||| |||||||||| |||||| Sbjct 37341 TACACAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTACG 37282 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 37281 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTA 37232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828715526891