Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3350 78.8 2e-12 seq2155 77.0 6e-12 seq769 77.0 6e-12 >seq3350 Length=1252 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/90 (81%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 ||| ||||| | |||||||||| |||||||||||||||||| ||||| ||||||| |||| Sbjct 989 AAGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTGTGGGCTGCACGCGTGCTA 1047 Query 165 CACTGACAGAGCCAACGAGTTCATCACCTT 194 || || || || || |||| || |||| Sbjct 1048 CAATGTGAGCAGCAGCGTGTTC-TCGCCTT 1076 >seq2155 Length=1334 Score = 77.0 bits (84), Expect = 6e-12 Identities = 72/89 (81%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||||||||| ||||| ||||||| ||||| Sbjct 160 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAGATGTTGTGGGCTGCACGCGTGCTAC 102 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTT 194 | || || || || |||| || |||| Sbjct 101 AATGTGAGCAGCAGCGTGTTC-TCGCCTT 74 >seq769 Length=1300 Score = 77.0 bits (84), Expect = 6e-12 Identities = 56/64 (88%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| | |||||||||| |||||||||||| ||||||||||| ||||||| ||||| Sbjct 69 AGATTGAG-CGATAACAGGTCCGTGATGCCCTTAAATGTTCTGGGCTGCACGCGTGCTAC 11 Query 166 ACTG 169 | || Sbjct 10 AATG 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947100345088