Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq7901 376 8e-102 >seq7901 Length=80373 Score = 376 bits (416), Expect = 8e-102 Identities = 425/566 (75%), Gaps = 25/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACT--CACCACCTGATTG 58 ||||||||| |||||||||| ||||| |||| ||| || |||| || ||| |||| Sbjct 41136 TCGACTTGTCGGTCTCGCAGTTAAGCTACCTTTTGCCATTGCACTATCAGCAC--GATTT 41079 Query 59 CCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCC 118 || ||| | ||| |||||| | | ||||||||||| ||||||||| | ||||||| Sbjct 41078 CCGACCGTACCTAGGTAACCTTCGAACTCCTCCGTTACACTTTGGGAGGAGA-CCGCCCC 41020 Query 119 AGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCC 178 ||| ||||| || |||| ||||||||||| | || ||| | || ||||||||||| | Sbjct 41019 AGTCAAACTGCCTACCATGCACTGTCCCCGATCCGGATAACGGACCAAGGTTAGAACCTC 40960 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | |||||| |||||||||||| || |||||| | |||||||| || ||| | Sbjct 40959 AAAGGGGTCAGGGTGGTATTTCAAGGTCGGCTCCACCAGAACTAGCGTCCTGGCTTCAAA 40900 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | ||||||||||||||||||||||| | | || ||||| | |||||| ||| ||||| Sbjct 40899 GCCTCCCACCTATCCTACACAAACCACTTCAAAGTCCAATGCAAAGCTACAGTAAAGGTT 40840 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||||| |||| || ||| | | ||||||| || ||| ||| ||| | Sbjct 40839 CACGGGGTCTTTCCGTCTAGCAGCGGGGAGATTGCATCTTCACAAACACTTCAACTTCGC 40780 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || || ||||||| || |||||||||||||||||| ||||||||||||| Sbjct 40779 TGAGTCTCAGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCGGGTCGGAACTTAC 40720 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 40719 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 40660 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 || || | | || ||| ||| ||| |||||||||||||||| Sbjct 40659 TCGATCAAGAG-CTTGCACCCCA----------TCA--------CTTAACCTTCCAGCAC 40619 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||| || ||||| || Sbjct 40618 CGGGCAGGCGTCACACCCTATACGTC 40593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702220890496