Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq7901 188 2e-45 >seq7901 Length=80373 Score = 188 bits (208), Expect = 2e-45 Identities = 217/288 (75%), Gaps = 13/288 (5%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACA-CG 59 ||||||||||||| ||||||||| ||||||||| | |||||| || |||| || || Sbjct 37272 GGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTACTGTCA---TCCCCCAGCG 37216 Query 60 ----TGG----AAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCAT 111 | | | || ||| ||||| | ||||| ||||||| ||| || ||||| | Sbjct 37215 ATATTAGCGCTAGGGATTTCCTCCCTGACAAAAGTCCTTTACAACCCGAAGG-CCTTCTT 37157 Query 112 CCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGC 171 | ||||| | ||||||| |||| || || |||||| |||| ||||| ||||||||| Sbjct 37156 CAGACACGCGGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCTGC 37097 Query 172 CTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 ||||||||||||| ||| |||||||||||| ||| ||||| ||| | |||||||||| || Sbjct 37096 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCGGATCATCCTCTCAGACCC 37037 Query 232 CCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| ||||| | || |||| || ||||| | || |||| ||||| Sbjct 37036 GCTACTGATCGTCGCCTTGGTGAGCTCTTACCTCACCAACTAGCTAAT 36989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068687551552