Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7552 430 1e-115 seq7526 233 2e-56 >seq7552 Length=2500597 Score = 430 bits (476), Expect = 1e-115 Identities = 1214/1845 (66%), Gaps = 41/1845 (2%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || ||||| |||||||||||||| | |||| |||||| | |||||||||||||| || Sbjct 1134893 TCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCCAGTT 1134952 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||| |||||||||| ||||| | | || |||| || ||||| Sbjct 1134953 TTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCC 1135012 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCCAT 65256 || || || || || ||||| || ||||||||| |||| ||||||||||| ||||| Sbjct 1135013 GCGACGTGAATGTTGAACGATTGCGACTGATCGATA-AACGCGCCACGATCTGCGGCCAT 1135071 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAG---GCGACGTACCT 65312 | ||| ||| || |||| |||||||| || || |||||||| |||| | ||| Sbjct 1135072 TTTGATGC-ACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTTCCT 1135130 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGAT-TACG 65370 || || || |||| | |||| || ||| | | || | | || | | | Sbjct 1135131 GC---GGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1135187 Query 65371 CATCGAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGA 65429 |||| || ||||| ||||| | | | | || || | | ||| | || | | Sbjct 1135188 TGTCGAGATC---CCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCA 1135244 Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | ||||||||||| ||||| || || | || | ||| |||||| || || || | Sbjct 1135245 CCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACG 1135304 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549 ||||| ||||||| |||||||| || || || || || ||||| || || | || || | Sbjct 1135305 ATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCG 1135364 Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTT 65609 | || || | |||| | | | || || | ||| ||| |||||||||||| | | Sbjct 1135365 AATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACA---GAT 1135421 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 ||||| ||| | |||||| || | |||| | | || | || |||| | Sbjct 1135422 C--CGTCGGT-TCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGC 1135478 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGG 65729 | | | | |||||| || || ||| | | |||||| | || || ||| Sbjct 1135479 CCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGC 1135538 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 | | || ||||| ||||| || | |||| || | | ||||| ||||| ||||||| Sbjct 1135539 CGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACG 1135598 Query 65790 GCATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848 | ||| | |||||||| || | ||||||| || || || || || ||||| || | Sbjct 1135599 G-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTG 1135657 Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908 || |||| |||||| || | ||||| || || || |||||||||| ||| || || Sbjct 1135658 TGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTG 1135717 Query 65909 TTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTT 65967 |||| |||||| || || | ||| | | | || | | | || ||| | |||| Sbjct 1135718 TTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTT-CAGCTTTGCAAAGTCATAC-GTTT 1135775 Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027 | || | | |||||| || | ||| | || || || ||||| Sbjct 1135776 TG-----TCTTGCTTT---------ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCA 1135821 Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087 || |||| ||| || | | ||||| |||||||| ||||||| || || Sbjct 1135822 TACCGCTACCTCATCCTTCGACGAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTT 1135881 Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 |||||||| | |||||| || ||||| || |||||||| ||||||||||||| |||||| Sbjct 1135882 GATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTA 1135941 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207 ||| |||||| || || || || || ||||| || ||| ||| | | |||||||| Sbjct 1135942 CGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCAC 1136001 Query 66208 CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 | || | | ||| | ||||| ||| || | ||||| ||| || Sbjct 1136002 CTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCC 1136061 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 ||| || || || | ||||| | ||| || |||||||| ||| | | | Sbjct 1136062 CCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGC 1136121 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 || ||||| |||| || || || ||||||||||| ||||| || | || ||||| || Sbjct 1136122 CTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCG 1136181 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 |||||| ||||| ||||| || ||||| ||||| || || || ||||||| Sbjct 1136182 GACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCA 1136241 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 || || || ||||||||||| | || || ||| |||||| || |||||||| || Sbjct 1136242 CGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCG 1136301 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || ||||||| |||| |||| |||||| || || ||||| || | || || || || Sbjct 1136302 TGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACC 1136361 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | |||| | ||| || || ||| ||| || ||||| || || |||||||||| Sbjct 1136362 GGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1136421 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 ||| || || ||||| | || || | | ||||| |||||| || | Sbjct 1136422 CTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGA 1136481 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 ||||||| ||| |||| || ||| ||||| | ||||| |||| || | || Sbjct 1136482 CATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGT 1136541 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | ||||| ||||||||| | |||| |||||| |||||||| | ||||| Sbjct 1136542 TGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATC 1136601 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 |||| |||||||| || || | ||| |||||||| | || || || || ||||| Sbjct 1136602 GATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGAC 1136661 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 | ||||||| | || ||||| || ||||||| ||| || Sbjct 1136662 GATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 1136706 >seq7526 Length=6110091 Score = 233 bits (258), Expect = 2e-56 Identities = 215/269 (80%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||||||||||||||| ||||||||||| ||||| ||| ||||||| || ||||| |||| Sbjct 4673770 AGGCGGAAGCTTCCTTTTGGACGGTGGAAGAGGTTGATCTGTCCAAGGATATGAAGGACT 4673711 Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222 ||||| || | | |||||| ||| || |||||| || ||| |||| ||||||| Sbjct 4673710 GGGAGTCGCTGAAACCGAGCG---AACGCCACTTCATTTCCCACGTGCTGGCCTTCTTTG 4673654 Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282 |||| || ||||||||||| || |||||| | ||||||| ||| ||||||||||| | Sbjct 4673653 CCGCGTCCGACGGTATCGTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGG 4673594 Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342 | |||||||||| || |||||||||||||||||||| ||||| ||||| ||| |||| Sbjct 4673593 TTACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGA 4673534 Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371 ||||| | || ||||| ||||||||| Sbjct 4673533 TGTACTCGCTGCTGATCGACACGTACATC 4673505 Score = 230 bits (254), Expect = 2e-55 Identities = 311/433 (72%), Gaps = 3/433 (1%) Strand=Plus/Minus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 |||||||||||||||| ||| | ||| ||||||||||| ||||| ||||| | || | Sbjct 4673379 TGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGCGGAAGGCGGACTGGGCGCTGAACT 4673320 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 ||||| | || | | ||| | ||||| || || | ||||||| || | ||| |||| Sbjct 4673319 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGG 4673260 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 || | || ||||| || || ||||| ||||| ||| ||||||| ||||| || |||| Sbjct 4673259 GTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 4673200 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || || |||||| || ||| |||| || |||||||| || |||| || || |||| Sbjct 4673199 CGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTG 4673140 Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696 | || | ||||| ||||||||| | |||||| ||||||| ||| |||| Sbjct 4673139 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAGA 4673083 Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756 | | || || ||||| ||||| ||||| || ||||| | || |||| || Sbjct 4673082 TCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGATA 4673023 Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816 | | |||||||| |||| || ||||||||||| ||||| ||||| ||||| ||| || Sbjct 4673022 TGCTGGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTTTGC 4672963 Query 61817 TGGTCGATTTGGG 61829 || |||| |||| Sbjct 4672962 TGCTCGAGCTGGG 4672950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397517021967440