Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 430 1e-115
seq7526 233 2e-56
>seq7552
Length=2500597
Score = 430 bits (476), Expect = 1e-115
Identities = 1214/1845 (66%), Gaps = 41/1845 (2%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
|| ||||| |||||||||||||| | |||| |||||| | |||||||||||||| ||
Sbjct 1134893 TCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCCAGTT 1134952
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
|| | || ||| |||||||||| ||||| | | || |||| || |||||
Sbjct 1134953 TTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCC 1135012
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGA-CCACGATCTGCAGCCAT 65256
|| || || || || ||||| || ||||||||| |||| ||||||||||| |||||
Sbjct 1135013 GCGACGTGAATGTTGAACGATTGCGACTGATCGATA-AACGCGCCACGATCTGCGGCCAT 1135071
Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAG---GCGACGTACCT 65312
| ||| ||| || |||| |||||||| || || |||||||| |||| | |||
Sbjct 1135072 TTTGATGC-ACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATTTCCT 1135130
Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGAT-TACG 65370
|| || || |||| | |||| || ||| | | || | | || | | |
Sbjct 1135131 GC---GGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1135187
Query 65371 CATCGAC-TCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGA 65429
|||| || ||||| ||||| | | | | || || | | ||| | || | |
Sbjct 1135188 TGTCGAGATC---CCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCA 1135244
Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489
| ||||||||||| ||||| || || | || | ||| |||||| || || || |
Sbjct 1135245 CCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACG 1135304
Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATG 65549
||||| ||||||| |||||||| || || || || || ||||| || || | || || |
Sbjct 1135305 ATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCG 1135364
Query 65550 AGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTT 65609
| || || | |||| | | | || || | ||| ||| |||||||||||| | |
Sbjct 1135365 AATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACA---GAT 1135421
Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669
||||| ||| | |||||| || | |||| | | || | || |||| |
Sbjct 1135422 C--CGTCGGT-TCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGC 1135478
Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGG 65729
| | | | |||||| || || ||| | | |||||| | || || |||
Sbjct 1135479 CCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGC 1135538
Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789
| | || ||||| ||||| || | |||| || | | ||||| ||||| |||||||
Sbjct 1135539 CGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACG 1135598
Query 65790 GCATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGA 65848
| ||| | |||||||| || | ||||||| || || || || || ||||| || |
Sbjct 1135599 G-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTG 1135657
Query 65849 TGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGA 65908
|| |||| |||||| || | ||||| || || || |||||||||| ||| || ||
Sbjct 1135658 TGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTG 1135717
Query 65909 TTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAATGTTT 65967
|||| |||||| || || | ||| | | | || | | | || ||| | ||||
Sbjct 1135718 TTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTT-CAGCTTTGCAAAGTCATAC-GTTT 1135775
Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027
| || | | |||||| || | ||| | || || || |||||
Sbjct 1135776 TG-----TCTTGCTTT---------ACAAACATGTTCAAGGCGATCGAGGCCAGATTGCA 1135821
Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087
|| |||| ||| || | | ||||| |||||||| ||||||| || ||
Sbjct 1135822 TACCGCTACCTCATCCTTCGACGAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTT 1135881
Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147
|||||||| | |||||| || ||||| || |||||||| ||||||||||||| ||||||
Sbjct 1135882 GATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTA 1135941
Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207
||| |||||| || || || || || ||||| || ||| ||| | | ||||||||
Sbjct 1135942 CGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCAC 1136001
Query 66208 CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267
| || | | ||| | ||||| ||| || | ||||| ||| ||
Sbjct 1136002 CTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCC 1136061
Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327
||| || || || | ||||| | ||| || |||||||| ||| | | |
Sbjct 1136062 CCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGC 1136121
Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387
|| ||||| |||| || || || ||||||||||| ||||| || | || ||||| ||
Sbjct 1136122 CTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCG 1136181
Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447
|||||| ||||| ||||| || ||||| ||||| || || || |||||||
Sbjct 1136182 GACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCA 1136241
Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507
|| || || ||||||||||| | || || ||| |||||| || |||||||| ||
Sbjct 1136242 CGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCG 1136301
Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567
|| ||||||| |||| |||| |||||| || || ||||| || | || || || ||
Sbjct 1136302 TGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACC 1136361
Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627
| |||| | ||| || || ||| ||| || ||||| || || ||||||||||
Sbjct 1136362 GGAGATGTACGTTCCCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGA 1136421
Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687
||| || || ||||| | || || | | ||||| |||||| || |
Sbjct 1136422 CTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGA 1136481
Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747
||||||| ||| |||| || ||| ||||| | ||||| |||| || | ||
Sbjct 1136482 CATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGT 1136541
Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807
|| | ||||| ||||||||| | |||| |||||| |||||||| | |||||
Sbjct 1136542 TGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATC 1136601
Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867
|||| |||||||| || || | ||| |||||||| | || || || || |||||
Sbjct 1136602 GATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGAC 1136661
Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912
| ||||||| | || ||||| || ||||||| ||| ||
Sbjct 1136662 GATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 1136706
>seq7526
Length=6110091
Score = 233 bits (258), Expect = 2e-56
Identities = 215/269 (80%), Gaps = 6/269 (2%)
Strand=Plus/Minus
Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165
|||||||||||||||| ||||||||||| ||||| ||| ||||||| || ||||| ||||
Sbjct 4673770 AGGCGGAAGCTTCCTTTTGGACGGTGGAAGAGGTTGATCTGTCCAAGGATATGAAGGACT 4673711
Query 61166 GGGAG-CGTTTAT--CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTG 61222
||||| || | | |||||| ||| || |||||| || ||| |||| |||||||
Sbjct 4673710 GGGAGTCGCTGAAACCGAGCG---AACGCCACTTCATTTCCCACGTGCTGGCCTTCTTTG 4673654
Query 61223 CCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAG 61282
|||| || ||||||||||| || |||||| | ||||||| ||| ||||||||||| |
Sbjct 4673653 CCGCGTCCGACGGTATCGTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGG 4673594
Query 61283 TGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA 61342
| |||||||||| || |||||||||||||||||||| ||||| ||||| ||| ||||
Sbjct 4673593 TTACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGA 4673534
Query 61343 TGTACAGTGTTCTCATCGATACGTACATC 61371
||||| | || ||||| |||||||||
Sbjct 4673533 TGTACTCGCTGCTGATCGACACGTACATC 4673505
Score = 230 bits (254), Expect = 2e-55
Identities = 311/433 (72%), Gaps = 3/433 (1%)
Strand=Plus/Minus
Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456
|||||||||||||||| ||| | ||| ||||||||||| ||||| ||||| | || |
Sbjct 4673379 TGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGCGGAAGGCGGACTGGGCGCTGAACT 4673320
Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516
||||| | || | | ||| | ||||| || || | ||||||| || | ||| ||||
Sbjct 4673319 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGG 4673260
Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576
|| | || ||||| || || ||||| ||||| ||| ||||||| ||||| || ||||
Sbjct 4673259 GTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 4673200
Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636
| || || |||||| || ||| |||| || |||||||| || |||| || || ||||
Sbjct 4673199 CGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTG 4673140
Query 61637 CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGA 61696
| || | ||||| ||||||||| | |||||| ||||||| ||| ||||
Sbjct 4673139 CCTGCCTGATGTTCAA---GTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAGA 4673083
Query 61697 TTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCAC 61756
| | || || ||||| ||||| ||||| || ||||| | || |||| ||
Sbjct 4673082 TCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGATA 4673023
Query 61757 TCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGT 61816
| | |||||||| |||| || ||||||||||| ||||| ||||| ||||| ||| ||
Sbjct 4673022 TGCTGGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTTTGC 4672963
Query 61817 TGGTCGATTTGGG 61829
|| |||| ||||
Sbjct 4672962 TGCTCGAGCTGGG 4672950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397517021967440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |