Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq7521 95.1 5e-14 seq7552 87.8 7e-12 >seq7521 Length=12184106 Score = 95.1 bits (104), Expect = 5e-14 Identities = 174/254 (69%), Gaps = 12/254 (5%) Strand=Plus/Minus Query 626199 TCGAATGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGACC 626258 |||| |||| ||| | ||| ||| | ||||| | || | || | ||| |||||||| Sbjct 6082590 TCGACTGGGCGGAGTGCTTCATGGCGATGGCCTTCCTGGCCGCGAAACGCAGCAAGGACC 6082531 Query 626259 CCAACACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGGCT 626318 || || |||||||| || |||||||| ||||||||||| || ||||| || || | Sbjct 6082530 CCTCGACACAGGTCGGTGCGTGCATCGTGAACGAGGACAACCGTATCGTGGGCATCGGGT 6082471 Query 626319 ACAACGGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGGAAGCGCGATAGCGCAT 626378 ||||||| || || ||||||| |||||| | || || ||| ||| | || Sbjct 6082470 ACAACGGATTTCCCAAGGGCTGCAGTGACGATGAGTTCCCGTGG----TCGAAAACG--- 6082418 Query 626379 GTGAGGACATT---CTCGACAGCAAGAGCCTCTATGTGGTTCACGCCGAACTCAACGCCA 626435 ||||| | ||||| | ||| ||| || ||| ||||| || | ||||| | Sbjct 6082417 --TCGGACAATCCGCTCGAGACGAAGTACCTGTACGTGTGCCACGCGGAGGTGAACGCGA 6082360 Query 626436 TCCTCAACAAGAAC 626449 | || ||||||||| Sbjct 6082359 TACTGAACAAGAAC 6082346 >seq7552 Length=2500597 Score = 87.8 bits (96), Expect = 7e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 21735 TGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACC 21794 || ||||||||||| || | ||| | |||||||| || || || ||||| || || Sbjct 330393 TGTGCGATGCGATCACCTTTCTTAACTTCAAAGTTTGTCTCGGAATGATTGAACAGTACA 330334 Query 21795 ACCCCGACCTTGCCCCTATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAGCCCGTT 21853 || ||||| || |||| | || || ||||||||| |||||||| || |||| ||| Sbjct 330333 ACTCCGACGTTACCCCGGT-AGTCCTCGTCGACGACACCGGCGCCCACATCGATGAAGTT 330275 Query 21854 CTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAG 21893 |||| ||||| ||| || | ||||| || ||||| ||| Sbjct 330274 TTTCACGGCCAAACCGGAACGTGGAGCCACCCGGCCATAG 330235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084451322272758