Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq14721 268 1e-69 seq4484 75.2 2e-11 >seq14721 Length=4462 Score = 268 bits (296), Expect = 1e-69 Identities = 199/229 (87%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||| |||||||||||| ||| | Sbjct 1694 GTACAAAGGGCAGGGACGTAATCAACGCATGCT-GATGACATGCGCTTACTAGGCATT-C 1637 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 1636 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 1577 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||| ||||| || |||||||| | ||||||||||||||||||| Sbjct 1576 ACCCAGACCTTTCGGACAAGGAAATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCG 1517 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1516 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 1468 >seq4484 Length=16537 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/58 (90%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58 |||||||||||||||||||| ||| ||| ||| |||||||| ||||||||||| |||| Sbjct 9077 GTACAAAGGGCAGGGACGTAATCAGCGCTAGC-TGATGACTAGCGCTTACTAGAAATT 9133 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/58 (90%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58 |||||||||||||||||||| ||| ||| ||| |||||||| ||||||||||| |||| Sbjct 9940 GTACAAAGGGCAGGGACGTAATCAGCGCTAGC-TGATGACTAGCGCTTACTAGAAATT 9996 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/58 (90%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58 |||||||||||||||||||| ||| ||| ||| |||||||| ||||||||||| |||| Sbjct 10803 GTACAAAGGGCAGGGACGTAATCAGCGCTAGC-TGATGACTAGCGCTTACTAGAAATT 10859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751749650975