Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq14721 847 0.0 seq11601 138 5e-30 seq9235 138 5e-30 seq10642 105 3e-20 >seq14721 Length=4462 Score = 847 bits (938), Expect = 0.0 Identities = 589/658 (90%), Gaps = 12/658 (2%) Strand=Plus/Plus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2580 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 2639 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2640 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 2699 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2700 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGGGATTGCAAC 2759 Query 208 CAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT-CAGG 266 ||||||||| ||| | || || |||| | | ||||| |||| | ||| | |||| Sbjct 2760 CAGACTTGCTCGC-GGTGTTCCGCCGGTCTTCTGACCGGTCTACTC-GCCGCGTTGCAGG 2817 Query 267 CCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTG 326 |||||||| || | || | |||| ||| | ||||||| || |||| ||| ||| Sbjct 2818 CCAGCATCGTCTGGTGCCGCTGGAT-AAGACTTGAGGAATGTAGCTCCCT--CGGGAGTG 2874 Query 327 TTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| ||| |||| || || | || | |||||||||||| ||||||||||| Sbjct 2875 TTATAGCCTCTTGTG--ATGCAGCGAGCGCCGGGC-GAGGTCCGCGCTTCGGCTAGGATG 2931 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||| Sbjct 2932 CTGGCGTAATGGTTGTAATCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATCTAT 2991 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 ||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||| Sbjct 2992 GCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAAAGTGAACGGAGGTGAGAACC--G 3049 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 | |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3050 CAAGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTATGAGCATAGCTG 3109 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3110 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 3169 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3170 GGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 3227 Score = 80.6 bits (88), Expect = 1e-12 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 637 GCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3296 GCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 3342 >seq11601 Length=7614 Score = 138 bits (152), Expect = 5e-30 Identities = 118/146 (81%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| ||||||||||| | ||||||||||||||| Sbjct 2449 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGAGGTAAACTCCTTCTAAAGCTAAAT 2390 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | | ||| ||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 2389 ACCGCCATGAGTCCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 2330 Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185 ||||||| ||| || |||||||| || Sbjct 2329 AGAGAGTCAAATAGTACGTGAAACTG 2304 Score = 131 bits (144), Expect = 7e-28 Identities = 99/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 || |||||||||||||||||||||||||||| ||| ||||| ||| |||||| ||| || Sbjct 1652 TGCGACCCGAAAGATGGTGAACTATGCCTGATCAGGTTGAAGTCAGGGGAAACCCTGATG 1593 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| || ||| ||||| ||||||||||||| |||| | ||||| |||||||||| Sbjct 1592 GAGGACCGAAGCAATTCTGACGTGCAAATCGATTGTCAGAGTTGGGCATAGGGGCGA 1536 >seq9235 Length=820 Score = 138 bits (152), Expect = 5e-30 Identities = 118/146 (81%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| ||||||||||| | ||||||||||||||| Sbjct 370 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGAGGTAAACTCCTTCTAAAGCTAAAT 429 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | | ||| ||||||||| ||||||| |||| ||||| ||||||||||| || | Sbjct 430 ACCGCCATGAGTCCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTCTGAAT 489 Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185 ||||||| ||| || |||||||| || Sbjct 490 AGAGAGTCAAATAGTACGTGAAACTG 515 >seq10642 Length=4996 Score = 105 bits (116), Expect = 3e-20 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| ||||| ||| |||||| ||| |||||| || ||| || Sbjct 2352 GTGAACTATGCCTGATCAGGTTGAAGTCAGGGGAAACCCTGATGGAGGACCGAAGCAATT 2293 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||||| |||| | ||||| |||||||||| Sbjct 2292 CTGACGTGCAAATCGATTGTCAGAGTTGGGCATAGGGGCGA 2252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079262870750