Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq12565 183 5e-44 seq6284 183 5e-44 seq3290 183 5e-44 seq10642 152 9e-35 seq14988 132 8e-29 seq905 131 3e-28 seq7719 109 9e-22 seq16696 84.2 4e-14 >seq12565 Length=3373 Score = 183 bits (202), Expect = 5e-44 Identities = 124/138 (90%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 805 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 863 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 864 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 923 Query 152 ATCGAAGGATCAAAAAGC 169 |||||||||||||||||| Sbjct 924 ATCGAAGGATCAAAAAGC 941 Score = 183 bits (202), Expect = 5e-44 Identities = 124/138 (90%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 2813 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 2871 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 2872 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 2931 Query 152 ATCGAAGGATCAAAAAGC 169 |||||||||||||||||| Sbjct 2932 ATCGAAGGATCAAAAAGC 2949 >seq6284 Length=10019 Score = 183 bits (202), Expect = 5e-44 Identities = 124/138 (90%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 2736 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 2678 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 2677 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 2618 Query 152 ATCGAAGGATCAAAAAGC 169 |||||||||||||||||| Sbjct 2617 ATCGAAGGATCAAAAAGC 2600 Score = 183 bits (202), Expect = 5e-44 Identities = 124/138 (90%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 4924 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 4866 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 4865 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 4806 Query 152 ATCGAAGGATCAAAAAGC 169 |||||||||||||||||| Sbjct 4805 ATCGAAGGATCAAAAAGC 4788 >seq3290 Length=17240 Score = 183 bits (202), Expect = 5e-44 Identities = 124/138 (90%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 16152 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 16094 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 16093 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 16034 Query 152 ATCGAAGGATCAAAAAGC 169 |||||||||||||||||| Sbjct 16033 ATCGAAGGATCAAAAAGC 16016 >seq10642 Length=4996 Score = 152 bits (168), Expect = 9e-35 Identities = 107/121 (88%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 975 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 1033 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 1034 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 1093 Query 152 A 152 | Sbjct 1094 A 1094 >seq14988 Length=351 Score = 132 bits (146), Expect = 8e-29 Identities = 76/78 (97%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct 351 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCAC 292 Query 198 AAGCCAGTTATCCCTGTG 215 |||||||||||||||||| Sbjct 291 AAGCCAGTTATCCCTGTG 274 >seq905 Length=2099 Score = 131 bits (144), Expect = 3e-28 Identities = 95/109 (87%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 780 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 722 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAG 140 | ||||||||||||| |||||| ||||| |||||| ||||||| Sbjct 721 GAAAGGGTGAACAATCCTACGCTTGGTGAATTTTGCTTCACAATGATAG 673 >seq7719 Length=857 Score = 109 bits (120), Expect = 9e-22 Identities = 63/65 (97%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 1 CATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCC 60 Query 211 CTGTG 215 ||||| Sbjct 61 CTGTG 65 >seq16696 Length=14837 Score = 84.2 bits (92), Expect = 4e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGA 182 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 7293 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCCACGTCGCTATGA 7245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854106385440