Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq14721 199 1e-48 seq12565 136 1e-29 seq10716 136 1e-29 seq10642 136 1e-29 seq6438 136 1e-29 >seq14721 Length=4462 Score = 199 bits (220), Expect = 1e-48 Identities = 138/156 (88%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 204 AAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGT 263 ||||||||||||||||||| |||||||| |||||||| ||||||||||| | | || Sbjct 153 AAGGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTATTCTACACCCCCTATGT 97 Query 264 CATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCG 323 | |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 96 CTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTG 37 Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 | |||||||||||||| ||||||||||||||||||| Sbjct 36 CGAAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATA 1 >seq12565 Length=3373 Score = 136 bits (150), Expect = 1e-29 Identities = 104/123 (85%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| || |||||| | || | |||| | | |||||||||||||||||| Sbjct 1961 CTCCCACCTATGCTGCACCTCCTATATCGCCTTACAATGCCAGACTAGAGTCAAGCTCAA 1902 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct 1901 CAGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 1842 Query 357 ATA 359 ||| Sbjct 1841 ATA 1839 >seq10716 Length=638 Score = 136 bits (150), Expect = 1e-29 Identities = 104/123 (85%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| || |||||| | || | |||| | | |||||||||||||||||| Sbjct 197 CTCCCACCTATGCTGCACCTCCTATATCGCCTTACAATGCCAGACTAGAGTCAAGCTCAA 256 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct 257 CAGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 316 Query 357 ATA 359 ||| Sbjct 317 ATA 319 >seq10642 Length=4996 Score = 136 bits (150), Expect = 1e-29 Identities = 104/123 (85%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| || |||||| | || | |||| | | |||||||||||||||||| Sbjct 618 CTCCCACCTATGCTGCACCTCCTATATCGCCTTACAATGCCAGACTAGAGTCAAGCTCAA 677 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct 678 CAGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 737 Query 357 ATA 359 ||| Sbjct 738 ATA 740 Score = 107 bits (118), Expect = 6e-21 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 || |||||||||||||||||||||||||||| | | |||||||||||||||||||||| Sbjct 144 GTTAAGCTCAACAGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGT 203 Query 346 GGTTTCGCTAGATA 359 |||||||||||||| Sbjct 204 GGTTTCGCTAGATA 217 >seq6438 Length=709 Score = 136 bits (150), Expect = 1e-29 Identities = 104/123 (85%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| || |||||| | || | |||| | | |||||||||||||||||| Sbjct 427 CTCCCACCTATGCTGCACCTCCTATATCGCCTTACAATGCCAGACTAGAGTCAAGCTCAA 368 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct 367 CAGGGTCTTCTTTCCCCGCTAGTGCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 308 Query 357 ATA 359 ||| Sbjct 307 ATA 305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634638063520