Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2173 421 5e-113 >seq2173 Length=41539 Score = 421 bits (466), Expect = 5e-113 Identities = 1215/1851 (66%), Gaps = 49/1851 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||||||||||||||||||||| | || | ||| || | | |||||||||||| ||| Sbjct 18569 TCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCCAGTC 18510 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || ||||| ||| || | ||| |||||||| | | || | || ||||| || Sbjct 18509 TTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTAGTTCGGTTCC 18450 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256 ||||| || || || |||||||| ||| |||||| |||| ||| || || || ||||| Sbjct 18449 GCCACGTGGATGTTGAACGACTGCGACTGGTCGATG-AACGCACCCCGGTCGGCTGCCAT 18391 Query 65257 GTCAATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || |||| |||||||| || || |||||||| || || || Sbjct 18390 CTGGATGC-ACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTTCCT 18332 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTG---CAATAATGCGATTACGCA 65372 | || || | ||| |||| ||||| || || | ||| || | || | || || Sbjct 18331 TCGGTATTTGCTCGATGTTCTGGATCGAGCC--GTTGTGGGCCAGGATTGTG-TTCTTCA 18275 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTT 65432 | || ||||| ||| | | |||| | | || ||| | || | || | Sbjct 18274 TATCATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCACCACCT 18215 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 | |||||||| ||||| || || ||| || | ||||||||| || || || || | Sbjct 18214 GAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGACT 18155 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| | |||||| || || || || || ||||| || |||| || || ||||| Sbjct 18154 CGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGT 18095 Query 65553 TTCGCAATCCGTTCATTTCAATGTTGTGACGCAAT-TCGTCCCAGTTCCACATCGGTTTA 65611 | |||| |||| | |||| || | || ||| |||| ||||||| ||| Sbjct 18094 TGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCG-CCCAATTCCACA--GGTC-- 18040 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 ||||| | || | |||||| || | ||||| | || | || |||| || || Sbjct 18039 -CGTCGGTA-CCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAGACCCC 17982 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 | | | |||||| |||||||| ||| | | ||||| | || || || | Sbjct 17981 TCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCG 17922 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 | || |||||||| || || | |||| || | | ||||| | ||||||||||| Sbjct 17921 TAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCGCACTCTCGTACGGG 17862 Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851 | ||||||| || || | || |||| ||| || || || |||||||| ||||| || Sbjct 17861 AAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGG 17802 Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911 |||| || || || |||| || || || |||||| | || | |||||||| ||| Sbjct 17801 CGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTCGATAATCTTGTTC 17742 Query 65912 AAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTAG 65969 || ||||| ||||| | | | ||| || || | |||||||| | | Sbjct 17741 AAGTTGCGCGTCACGATTTTGGC--TACCTCTTTCAGCTTCGCGAAATCATAC------G 17690 Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029 ||| |||| | |||| ||| || | |||| || || |||||||| | Sbjct 17689 TACGGTCGGA----CTGGACG-----AACATGTTCAACGCAATCGAGGCCAGGTTGCACA 17639 Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089 | || | ||||| | | ||||| ||||| |||||||| || ||| ||| | Sbjct 17638 CCGCCACTTCGTCCTTCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGA 17579 Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149 ||||||| | || || || || || ||||||||||| || |||||||||| |||||||| Sbjct 17578 TGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACG 17519 Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC- 66208 | ||| ||||| || ||||| || ||||| || ||| ||| | | ||||| ||| Sbjct 17518 GTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATCCTGCGCCTTTACCT 17459 Query 66209 ---GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 | | | | || || |||| || || ||| | | ||||| ||| Sbjct 17458 GGCGGATGAAGCGGCCCTCCTTC----TCATAGCCCGTGTACAACTTCTCGAACTCTTCG 17403 Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325 ||||| |||| || | ||||| | ||| || ||||||| ||| | | | Sbjct 17402 CCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTC 17343 Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 || || || |||| || ||||| || |||||||| |||||||| | || ||||| Sbjct 17342 GCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCG 17283 Query 66386 CGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 || |||||| ||||| ||||| || || | |||||||| | ||| | ||| Sbjct 17282 CGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGC 17223 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 || || |||||||||||||| |||| ||| || || ||| || || |||||||| Sbjct 17222 CACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTAC 17163 Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565 || || |||||| | || |||| |||||| || | |||||| || | || || ||| Sbjct 17162 CGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTG 17103 Query 66566 CCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 ||| |||| | ||| ||||| || ||| || ||||| || || |||||||| Sbjct 17102 CCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCA 17043 Query 66626 GTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCC 66685 | ||| ||||| || || | || || | | ||||| || ||| ||| | Sbjct 17042 GACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCG 16983 Query 66686 TTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGG 66745 |||||||| || |||| || || ||||| | || || |||| ||| | | Sbjct 16982 GACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAGCCGCCGCGAACATG 16923 Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATG--GCGAGACATGTAATTGTACGTCTCGATGACAG 66803 || || | || || ||||||||| | ||||| | ||| ||||||||||| ||| Sbjct 16922 GTCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAG--ATTATACGTCTCGATCGCAG 16865 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT 66863 | || |||| |||||| || |||| || |||||||| | | || |||| | Sbjct 16864 CCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCT 16805 Query 66864 CGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 |||| | | ||||||| | || || || || || |||||||| |||| Sbjct 16804 CGACAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTTTGA 16754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397401489203600