Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_033006.1 Length=11332 Score E Sequences producing significant alignments: (Bits) Value seq4993 118 8e-23 >seq4993 Length=28616 Score = 118 bits (130), Expect = 8e-23 Identities = 275/410 (67%), Gaps = 6/410 (1%) Strand=Plus/Plus Query 6382 ATAGGATTAAAAGAGAAGGAAAGAGAACTAAAGGAGGATGGTAGATTCTACTGCC-TAAT 6440 || || |||| || || ||||||||||| ||| | |||||||||| |||| |||| Sbjct 21474 ATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCT-TTGCCTTAAT 21532 Query 6441 GTCCTGGGCCTTGAGGGAATATTTTGTCGTCACTGAGTATTTGATTAAATTACATTTTAT 6500 ||| ||| | ||| | |||||||||| | || ||| || ||||| |||||| | Sbjct 21533 GTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCATTTTGT 21592 Query 6501 TCCTCTTTTTAAGGGTCTGACTGTCGCTGATGACATGACAACAC--TAATCAAGAAGATG 6558 ||||| | |||||| ||||| | || || | || ||||||| |||| || |||||| Sbjct 21593 CCCTCTCTGTAAGGGGTTGACTATGGCAGACG--ATTACAACACTGTAATTAACAAGATG 21650 Query 6559 ATGGATAATTCTTCAGGACAAGGATTAGATGATTATTCCAGAGTTTCTTATGCGAACCAT 6618 || | ||| ||||||| | | || ||| | |||| || || || ||| Sbjct 21651 TTGCAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCCAATCAT 21710 Query 6619 TTAGATTATGAGAAGTGGAATAACTATCAGCGTATAGAATCCAACGGGCCTACATTCAGA 6678 |||| ||| ||||| || || |||||| | | |||| | || | || |||||| Sbjct 21711 GTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTCTTCAGA 21770 Query 6679 GTAATGGGACAGTTTTTGGGTTATCCTAACCTAATATACAGAACTCATGAATTCTTTCAA 6738 || ||||| | |||| | | || | | | |||||||||| || ||| | Sbjct 21771 GTTATGGGCCTGTTTGTCAGGATGGAGAATTTGTTCTGTCGAACTCATGAGTTTTTTGAG 21830 Query 6739 AAATCTGTGATCTATTATACTCAAAGACCAGATCTAATGATGGTAAAAGA 6788 ||||| | |||| ||| | ||||| ||||||||||| || |||| Sbjct 21831 AAATCATTCTTCTACTATCGCGACAGACCTGATCTAATGATAATAGAAGA 21880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36133225266560