Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq4993 145 6e-31 >seq4993 Length=28616 Score = 145 bits (160), Expect = 6e-31 Identities = 290/424 (68%), Gaps = 7/424 (2%) Strand=Plus/Plus Query 6226 GCTAGTAATAGGTCTAAGAGCTAAAGAAAGAGAATTAAAATTAACAGGGAGGTTTTTTGC 6285 |||||| || || ||||||| |||||||||||| | || | || || || ||||| Sbjct 21467 GCTAGTCATCGGGTTAAGAGCAAAAGAAAGAGAACTGAAGCTTGTCGGTAGATTCTTTGC 21526 Query 6286 TTTAATGTCTTGGGAGTTGAGAGAGTATTTTGTTATAACTGAGTGGCTCATAAAGAAGTA 6345 |||||||||||| ||| |||| ||||||| ||| || ||| | | || |||||| | Sbjct 21527 CTTAATGTCTTGGACTTTGCGAGAATATTTTGGTATTACGGAGCTGTTAATTAAGAAGCA 21586 Query 6346 TTTCGTTCC-GTTACTAAGAGACTTAACAATGGCAGACGACTTGAATGATGTCATAAGTA 6404 ||| || || | |||| | || || ||||||||||| | || ||| || | | Sbjct 21587 TTTTGTCCCTCTCTGTAAG-GGGTTGACTATGGCAGACGATTACAACACTGTAATTAACA 21645 Query 6405 AAATGTTGTCTAG-TACATCAGGACAAGGGTTGGATGACTACTCAGTAGTATCTATTTCT 6463 | |||||| | || | || ||||||| | || || || ||| |||| | Sbjct 21646 AGATGTTG-CAAGCTTCAGAAGGACAAAGCACGGGAGAATATGACCAAGTTACTATAGCC 21704 Query 6464 AACCACTTAGATTACGAGAAATGGAACAATCACCAAAGGAAGGAATCAAATGATCCTGTA 6523 || || |||| || || || |||||| | || ||||| ||| | ||||| || || Sbjct 21705 AATCATGTAGACTATAGTAAGTGAAACAATTATCAGAGGAAAGAAGCTAATGACCCAGTC 21764 Query 6524 TTCAGAGTGATGGGTCAATTTTTGGGAAAGCCTAACTTATTCACTAGGACACATGAGTTT 6583 |||||||| ||||| | ||| | | | | || || ||| | | || ||||||||| Sbjct 21765 TTCAGAGTTATGGGCCTGTTTGTCAGGATGGAGAATTTGTTCTGTCGAACTCATGAGTTT 21824 Query 6584 TTCGAGAAATCGTTGATTTATTATGTTGATAGACCTGAT---TTGATAAGAGTAGATGAG 6640 || |||||||| || | || ||| || ||||||||| |||||| || ||||| | Sbjct 21825 TTTGAGAAATCATTCTTCTACTATCGCGACAGACCTGATCTAATGATAATAGAAGATGGG 21884 Query 6641 GAGA 6644 | || Sbjct 21885 GTGA 21888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40022920904320