Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1 123 5e-26 >seq1 Length=7490 Score = 123 bits (136), Expect = 5e-26 Identities = 187/260 (72%), Gaps = 17/260 (7%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTC----GAATACATTA 126 ||||| ||||| ||||||||||| || |||||||| | ||| ||||| | Sbjct 6392 TTTACCTTGAACAAATTAGAGTGCTCTAAGCAGGCTACATATGCGGCCGAGAATAATCTT 6333 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTA---TTTTGTTGGTTTCTAG---GACC- 179 |||||||||||| ||||| ||| | |||| || ||| ||||||| || ||| Sbjct 6332 GCATGGAATAATGGAATATGACCT-CGGTCTTAATCTTTCATTGGTTTGTAATCAGACTC 6274 Query 180 -GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 | ||||||||||| || |||| ||||| | |||||| | ||||||||||| Sbjct 6273 AGAGGTAATGATTAACAGAAGTAGTTGGGGGCATTAGTATTACGGCGCGAGAGGTGAAAT 6214 Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 || | || ||||||||||| |||||||| || ||||||||| |||||||||| Sbjct 6213 TCGTAGACCGTCGTAAGACTAACTAAAGCGAAAGCATTTGCCAAGGATGCTTTCATTAAT 6154 Query 299 CAGTGAACGAAAGTTAGGGG 318 || ||||||||||||| || Sbjct 6153 CA-AGAACGAAAGTTAGAGG 6135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915179682560