Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq29 199 1e-48 >seq29 Length=371068 Score = 199 bits (220), Expect = 1e-48 Identities = 300/419 (72%), Gaps = 23/419 (5%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||||||| ||| || ||||| | ||||||| ||||||| ||||||||| | ||||| Sbjct 326 TTTACAACCCATAGGGCCGTCTTCCTGCACGCGGGATGGCTGGATCAGGCTTCCACCCAT 385 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 ||| ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 386 TGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTG 445 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| | ||| |||||||| || ||| ||||| | || |||| ||| ||||| | || Sbjct 446 TGGGGGATCACCCTCTCAGGCCCCCTAAAGATCGCAGACTTGGTGAGCCGTTACCTCACC 505 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||| |||||| | | ||| | || | ||| || | | | || Sbjct 506 AACTATCTAATCTTGCGCGTGCCCAT-CTCTATCCA-----CCGGAGTTTTCAATATTAA 559 Query 244 GTCTTGCGAC-------GTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCC 296 || ||| || ||||| ||||||| | | |||| | || ||||||||| Sbjct 560 GTGATGCCACTCAATATATTATGGGGTATTAATCTTCCTTTCGAAAGGCTATCCCCCTGA 619 Query 297 ATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGC 355 ||||| ||| | || || | ||||||| |||| ||| ||| || | | ||| Sbjct 620 TAAAGGCAGGTTGCACACGTGTTCCGCACCCGTACGCCGCTC-TCA-AGATCCCGAAAGA 677 Query 356 TGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | || ||||| ||| |||||||||||||||||| |||| |||||||| ||||| Sbjct 678 T-CT-----CTACCGCTCGGCTTGCATGTGTTAGGCCTCCCGCTAGCGTTCATCCTGAG 730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222372862720