Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20darlingi_20[genbank_20GCA_5F000211455.3_202013-12-20] 2,220 sequences; 136,935,538 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq29 286 1e-74 >seq29 Length=371068 Score = 286 bits (316), Expect = 1e-74 Identities = 368/501 (73%), Gaps = 24/501 (5%) Strand=Plus/Minus Query 21 AGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATAC 80 ||||||||| ||||||| | ||| |||| | |||||||| | || ||||| | | Sbjct 662 AGAGCGGCGTACGGGTGCGGAACACGTGTGCAACCTGCCTTTATCAGGGGGATAGCCTTT 603 Query 81 CGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTC 140 ||||||| | |||||| |||||||| || | |||| || | ||| ||| Sbjct 602 CGAAAGGAAGATTAATACCCCATAATATA-TTGAGTGGCATCACTTAATATTGAAAACTC 544 Query 141 CGGCGGTACAG-GATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAA 199 ||| || | || ||| | | |||| |||||| |||||||| ||||||||||| ||||| Sbjct 543 CGGTGG-ATAGAGATGGGCACGCGCAAGATTAGATAGTTGGTGAGGTAACGGCTCACCAA 485 Query 200 GGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTC 259 | | ||||| ||| | ||||||||||||||| ||||| ||| |||||||||||| | Sbjct 484 GTCTGCGATCTTTAGGGGGCCTGAGAGGGTGATCCCCCACACTGGTACTGAGACACGGAC 425 Query 260 CAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAG 319 || |||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||| Sbjct 424 CAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGACAATGGGTGGAAGCCTGATCCAG 365 Query 320 CAACGCCGCGTGAGCGATGAAGG-CCTTCGGGTCGTAAA--GC-----TCTG-------T 364 | | ||||||| || || || ||| |||| ||||| || |||| Sbjct 364 CCATCCCGCGTGCAGGAAGACGGCCCTATGGGTTGTAAACTGCTTTTATCTGGGGATAAA 305 Query 365 CCT-----CAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCC 419 ||| | | ||| ||| ||||| || || |||| |||||||||| |||||| Sbjct 304 CCTACTTACGTGTAAGTAGCTGAAGGTACCAGAAGAATAAGCACCGGCTAACTCCGTGCC 245 Query 420 AGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGT 479 |||||||||||||||||| |||| || ||||||||||||| ||| | ||| |||||||| Sbjct 244 AGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTTA-TTGGGTTTAAAGGGT 186 Query 480 GCGTAGGTGGTTTCTTAAGTC 500 |||||| || | |||||| Sbjct 185 CCGTAGGCGGACTGATAAGTC 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497566753280